Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PF13406 across 148 genomes · 5927 ms.

Species with hits:HOLIG 5CXAMA 5AAURI2 1HVIRI 1TSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold3902.g2.t1PF13406Transglycosylase SLT domainInterproscanJBrowse
CXAMACxam_g2106.t1PF13406Transglycosylase SLT domainInterproscanJBrowse
CXAMACxam_g3390.t1PF13406Transglycosylase SLT domainInterproscanJBrowse
CXAMACxam_g2055.t1PF13406Transglycosylase SLT domainInterproscanJBrowse
CXAMACxam_g2564.t1PF13406Transglycosylase SLT domainInterproscanJBrowse
CXAMACxam_g2529.t1PF13406Transglycosylase SLT domainInterproscanJBrowse
HOLIGHOLI00001.G52226PF13406Transglycosylase SLT domainInterproscanJBrowse
HOLIGHOLI03105.G4931PF13406Transglycosylase SLT domainInterproscanJBrowse
HOLIGHOLI00353.G42776PF13406Transglycosylase SLT domainInterproscanJBrowse
HOLIGHOLI00001.G52230PF13406Transglycosylase SLT domainInterproscanJBrowse
HOLIGHOLI00353.G42775PF13406Transglycosylase SLT domainInterproscanJBrowse
HVIRIBRAKERKREP00000023441.1PF13406Transglycosylase SLT domainInterproscanJBrowse
TSPClavulariidae_g13553PF13406Transglycosylase SLT domainInterproscanJBrowse

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