Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 30 gene–annotation pairs matching PF13411 across 148 genomes · 49 ms.

Species with hits:Hydra oligactis 17Cassiopea xamachana 7Aurelia aurita complex sp. Pacific 2Montipora grisea 2Exaiptasia diaphana 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold6073.g1.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold10.g210.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g10571.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g3993.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g4222.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g25468.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g1525.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g2396.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g11663.t1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Exaiptasia diaphanaKXJ04928.1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI02150.G23246PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G50930PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G49333PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00150.G2359PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00059.G25733PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G53619PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI01031.G13011PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00256.G41053PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI02969.G47633PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00264.G3302PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00643.G15854PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G52000PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00256.G40390PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00655.G56881PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00002.G17779PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00256.G40946PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI02137.G15449PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023346.1PF13411MerR HTH family regulatory proteinInterproscanJBrowse
Montipora griseaANN28932-RAPF13411MerR HTH family regulatory proteinInterproscanJBrowse
Montipora griseaANN21039-RAPF13411MerR HTH family regulatory proteinInterproscanJBrowse

TOP