Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 35 gene–annotation pairs matching PF13518 across 148 genomes · 18 ms.

Species with hits:Candelabrum cocksii 4Heliopora coerulea 3Hydra viridissima 2Porites rus 2Nanomia septata 2Millepora complanata 2Montipora cactus 2Millepora alcicornis 1Podabacia crustacea 1Muricea muricata 1Montipora grisea 1Montipora efflorescens 1Millepora dichotoma 1Acropora digitifera 1Hydra vulgaris 1Acropora florida 1Henneguya salminicola 1Hydra oligactis 1Galaxea fascicularis 1Dendronephthya gigantea 1Duncanopsammia axifuga 1Catalaphyllia jardinei 1Callogorgia gracilis 1Acropora intermedia 1Thelohanellus kitauei 1
SpeciesGene IDPfam termMatchSourceBrowser
Acropora digitiferag17864.t1PF13518Helix-turn-helix domainInterproscanJBrowse
Acropora floridaaflo_s0598.g1.t1PF13518Helix-turn-helix domainInterproscanJBrowse
Acropora intermediaaint_s0545.g9.t1PF13518Helix-turn-helix domainInterproscanJBrowse
Candelabrum cocksiiENSQNNP00000014765.1PF13518Helix-turn-helix domainInterproscanJBrowse
Candelabrum cocksiiENSQNNP00000005919.1PF13518Helix-turn-helix domainInterproscanJBrowse
Candelabrum cocksiiENSQNNP00000019948.1PF13518Helix-turn-helix domainInterproscanJBrowse
Candelabrum cocksiiENSQNNP00000005916.1PF13518Helix-turn-helix domainInterproscanJBrowse
Callogorgia gracilisENSFVQP00000017126.1PF13518Helix-turn-helix domainInterproscanJBrowse
Catalaphyllia jardineiENSAVKP00000041446.1PF13518Helix-turn-helix domainInterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000010209.1PF13518Helix-turn-helix domainInterproscanJBrowse
Dendronephthya giganteaXP_028416821.1PF13518Helix-turn-helix domainInterproscanJBrowse
Galaxea fascicularisgfas1.m1.21350.m1PF13518Helix-turn-helix domainInterproscanJBrowse
Heliopora coeruleaENSBQFP00000047165.1PF13518Helix-turn-helix domainInterproscanJBrowse
Heliopora coeruleaENSBQFP00000039345.1PF13518Helix-turn-helix domainInterproscanJBrowse
Heliopora coeruleaENSBQFP00000006797.1PF13518Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00580.G30136PF13518Helix-turn-helix domainInterproscanJBrowse
Henneguya salminicolaKAF0989081.1PF13518Helix-turn-helix domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000014513.1PF13518Helix-turn-helix domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000011624.1PF13518Helix-turn-helix domainInterproscanJBrowse
Hydra vulgarisXP_065667822.1PF13518Helix-turn-helix domainInterproscanJBrowse
Millepora alcicornisENSCIQP00000018557.1PF13518Helix-turn-helix domainInterproscanJBrowse
Montipora cactusBRAKERNUSP00000050603.1PF13518Helix-turn-helix domainInterproscanJBrowse
Montipora cactusBRAKERNUSP00000017560.1PF13518Helix-turn-helix domainInterproscanJBrowse
Millepora complanataENSODKP00000030994.1PF13518Helix-turn-helix domainInterproscanJBrowse
Millepora complanataENSODKP00000030988.1PF13518Helix-turn-helix domainInterproscanJBrowse
Millepora dichotomaENSYDOP00000046368.1PF13518Helix-turn-helix domainInterproscanJBrowse
Montipora efflorescensENSTIFP00000043989.1PF13518Helix-turn-helix domainInterproscanJBrowse
Montipora griseaANN12104-RAPF13518Helix-turn-helix domainInterproscanJBrowse
Muricea muricataBRAKERXEIP00000006580.1PF13518Helix-turn-helix domainInterproscanJBrowse
Nanomia septataANN21039-RAPF13518Helix-turn-helix domainInterproscanJBrowse
Nanomia septataANN24564-RAPF13518Helix-turn-helix domainInterproscanJBrowse
Podabacia crustaceaPcrG011431.mRNA1PF13518Helix-turn-helix domainInterproscanJBrowse
Porites rusENSGYQP00005017049.1PF13518Helix-turn-helix domainInterproscanJBrowse
Porites rusENSGYQP00005017040.1PF13518Helix-turn-helix domainInterproscanJBrowse
Thelohanellus kitaueiKII69860.1PF13518Helix-turn-helix domainInterproscanJBrowse

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