Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF13531 across 148 genomes · 48 ms.

Species with hits:Hydra oligactis 11Cassiopea xamachana 4Aurelia aurita complex sp. Pacific 1Hydra viridissima 1Hydra vulgaris 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold3814.g1.t1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g12902.t1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g6764.t1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g10907.t1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g13724.t1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI01051.G37012PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI01051.G37012PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G10217PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G49156PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9727PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9709PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G53078PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI02137.G15453PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI01017.G23321PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI02137.G15457PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra oligactisHOLI00150.G2169PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000008298.1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse
Hydra vulgarisXP_065663420.1PF13531Bacterial extracellular solute-binding proteinInterproscanJBrowse

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