Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF13742 across 148 genomes · 44 ms.

Species with hits:Cassiopea xamachana 2Hydra oligactis 2Montipora grisea 2Calvadosia cruxmelitensis 1Hydra viridissima 1Morbakka virulenta 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg391.t1PF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Cassiopea xamachanaCxam_g919.t1PF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Cassiopea xamachanaCxam_g14069.t1PF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2213PF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53878PF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023494.1PF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Montipora griseaANN21755-RAPF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Montipora griseaANN21501-RAPF13742OB-fold nucleic acid binding domainInterproscanJBrowse
Morbakka virulentascaffold121.g104.t1PF13742OB-fold nucleic acid binding domainInterproscanJBrowse

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