Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 20 gene–annotation pairs matching PF16040 across 148 genomes · 37 ms.

Species with hits:Hydractinia echinata 2Metridium senile 2Aurelia aurita 1Tripedalia maipoensis 1Turritopsis dohrnii 1Sanderia malayensis 1Pelagia noctiluca 1Nemopilema nomurai 1Morbakka virulenta 1Mastigias papua 1Aurelia aurita complex sp. Pacific 1Millepora dichotoma 1Hydractinia symbiolongicarpus 1Cassiopea sp. PORT0000214 1Catostylus mosaicus 1Bougainvillia cf. muscus 1Aurelia sp. 4 Dawson et al 2005 1Turritopsis rubra 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia auritascaffold194.g14.t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold267.g3.t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000005718.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Bougainvillia cf. muscusM_g28877.t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Catostylus mosaicusENSSJYP00000022153.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000019122.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Hydractinia echinataENSDJXP00000003135.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Hydractinia echinataENSDJXP00000003129.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g03.05723_t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Millepora dichotomaENSYDOP00000033090.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Mastigias papuaBRAKERKYLP00000019295.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Metridium senileENSDTNP00000029619.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Metridium senileENSDTNP00000029628.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Morbakka virulentascaffold469.g9.t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Nemopilema nomuraiBRAKERMNPP00000005201.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Pelagia noctilucaENSXLYP00000005663.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Sanderia malayensisENSXQXP00000016107.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Turritopsis dohrniiTur_r2.0_p0015.1.g16193.t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Tripedalia maipoensisg6297.t1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000008066.1PF16040E3 ubiquitin-protein ligase APD1-4, N-terminalInterproscanJBrowse

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