Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF16321 across 148 genomes · 32 ms.

Species with hits:Cassiopea xamachana 1 Hydractinia symbiolongicarpus 1 Montipora grisea 1 Morbakka virulenta 1 Palythoa mizigama 1

Species	Gene ID	Pfam term	Match	Source	Browser
Cassiopea xamachana	Cxam_g5530.t1	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02443_t1	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus	Interproscan	JBrowse
Montipora grisea	ANN30269-RA	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus	Interproscan	JBrowse
Morbakka virulenta	scaffold121.g348.t1	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus	Interproscan	JBrowse
Palythoa mizigama	c2780.g012.t1.p1	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus	Interproscan	JBrowse