Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching PF16697 across 148 genomes · 4827 ms.

Species with hits:MGRIS 5SMALA 2AALAT 1AAURI1 1AIDSS 1ASP2 1ASP3 1EDIAP 1HVIRI 1MPAPU 1MVIRU 1RESCU 1
SpeciesGene IDPfam termMatchSourceBrowser
AALATAala_g1650.t1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
AAURI1scaffold82.g50.t1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
AIDSSalvinactis_v1_g937PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
ASP2Actinostola_19774PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
ASP34_ENSDKXP00000003894.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
EDIAPKXJ16145.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
HVIRIBRAKERKREP00000022954.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MGRISANN35157-RAPF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MGRISANN30240-RAPF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MGRISANN39908-RAPF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MGRISANN21350-RAPF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MGRISANN40825-RAPF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MPAPUBRAKERKYLP00000012579.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
MVIRUscaffold296.g21.t1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
RESCUXP_065071797.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
SMALAENSXQXP00000008245.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse
SMALAENSXQXP00000008253.1PF16697Inner membrane component of T3SS, cytoplasmic domainInterproscanJBrowse

TOP