Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF20260 across 148 genomes · 6960 ms.

Species with hits:HOLIG 2HVIRI 2MGRIS 2CCRUX 1CXAMA 1HECHI 1HSYMB 1SPIST 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg652.t1PF20260RNA methyltransferase PUA domainInterproscanJBrowse
CXAMACxam_g4266.t1PF20260RNA methyltransferase PUA domainInterproscanJBrowse
HECHIENSDJXP00000054681.1PF20260RNA methyltransferase PUA domainInterproscanJBrowse
HOLIGHOLI00014.G9888PF20260RNA methyltransferase PUA domainInterproscanJBrowse
HOLIGHOLI00002.G19212PF20260RNA methyltransferase PUA domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02709_t1PF20260RNA methyltransferase PUA domainInterproscanJBrowse
HVIRIg19681.t1.1PF20260RNA methyltransferase PUA domainInterproscanJBrowse
HVIRIBRAKERKREP00000022601.1PF20260RNA methyltransferase PUA domainInterproscanJBrowse
MGRISANN26870-RAPF20260RNA methyltransferase PUA domainInterproscanJBrowse
MGRISANN22106-RAPF20260RNA methyltransferase PUA domainInterproscanJBrowse
SPISTPFX11294.1PF20260RNA methyltransferase PUA domainInterproscanJBrowse

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