Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF20468 across 148 genomes · 33 ms.

Species with hits:Aurelia aurita 1Aurelia sp. 4 Dawson et al 2005 1Anthopleura xanthogrammica 1Cladopsammia gracilis 1Catostylus mosaicus 1Cassiopea sp. PORT0000214 1Nemopilema nomurai 1Porites cylindrica 1Palythoa mizigama 1Palythoa umbrosa 1Rhopilema esculentum 1Sanderia malayensis 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia auritascaffold156.g13.t1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000030470.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Anthopleura xanthogrammicaENSOJPP00000021259.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Cladopsammia gracilisBRAKERTYJP00000003921.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Catostylus mosaicusENSSJYP00000007434.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000024603.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Nemopilema nomuraiBRAKERMNPP00000000933.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Porites cylindricaENSZOFP00000030174.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Palythoa mizigamac0813.g010.t1.p1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Palythoa umbrosac0028.g032.t1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Rhopilema esculentumXP_065066327.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse
Sanderia malayensisENSXQXP00000013248.1PF20468Hermansky-Pudlak syndrome 6 protein C-terminal domainInterproscanJBrowse

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