← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 111 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 102 / 111 | 91.9% | 100.0% of 102 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 102 / 111 | 91.9% | 100.0% of 102 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 101 / 111 | 91.0% | 99.0% of 102 | ≥80% support |
| PANTHER | PTHR19376 | DNA-DIRECTED RNA POLYMERASE | 77 / 111 | 69.4% | 76.2% of 101 | ≥50% support |
| Pfam | PF04998 | RNA_pol_Rpb1_5 — RNA polymerase Rpb1, domain 5 | 68 / 111 | 61.3% | 67.3% of 101 | ≥50% support |
| Pfam | PF04983 | RNA_pol_Rpb1_3 — RNA polymerase Rpb1, domain 3 | 62 / 111 | 55.9% | 61.4% of 101 | ≥50% support |
| Pfam | PF05000 | RNA_pol_Rpb1_4 — RNA polymerase Rpb1, domain 4 | 59 / 111 | 53.2% | 58.4% of 101 | ≥50% support |
| Pfam | PF00623 | RNA_pol_Rpb1_2 — RNA polymerase Rpb1, domain 2 | 58 / 111 | 52.3% | 57.4% of 101 | ≥50% support |
| Pfam | PF04997 | RNA_pol_Rpb1_1 — RNA polymerase Rpb1, domain 1 | 58 / 111 | 52.3% | 57.4% of 101 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Calvadosia cruxmelitensis | g1098.t1 | XP_034762288.1 | LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Acipenser ruthenus] | Q9P2N4 A disintegrin and metalloproteinase with thrombospondin moti | JBrowse |
| Calvadosia cruxmelitensis | g1099.t1 | XP_047122540.1 | uncharacterized protein LOC101234523 isoform X1 [Hydra vulgaris] | Q6ZV73 FYVE, RhoGEF and PH domain-containing protein 6 OS=Homo sapi | JBrowse |
| Calvadosia cruxmelitensis | g875.t1 | PCI28766.1 | DNA-directed RNA polymerase subunit beta' [SAR324 cluster bacterium] | Q39Y12 DNA-directed RNA polymerase subunit beta' OS=Geobacter metal | JBrowse |
| Calvadosia cruxmelitensis | g876.t1 | MBT4287848.1 | DNA-directed RNA polymerase subunit beta [Deltaproteobacteria bacterium] | A7HCH7 DNA-directed RNA polymerase subunit beta OS=Anaeromyxobacter | JBrowse |
