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Support counts the member genes carrying the term. % of genes is that count over all 264 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11252 | POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE | 243 / 264 | 92.1% | 99.6% of 244 | ≥80% support |
| Pfam | PF01138 | RNase_PH — 3' exoribonuclease family, domain 1 | 223 / 264 | 84.5% | 93.3% of 239 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 244 / 264 | 92.4% | 99.2% of 246 | ≥80% support |
| GO | GO:0004654 Molecular Function | polyribonucleotide nucleotidyltransferase activity | 243 / 264 | 92.1% | 98.8% of 246 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 243 / 264 | 92.1% | 98.8% of 246 | ≥80% support |
| GO | GO:0000175 Molecular Function | 3'-5'-RNA exonuclease activity | 243 / 264 | 92.1% | 98.8% of 246 | ≥80% support |
| GO | GO:0006401 Biological Process | RNA catabolic process | 243 / 264 | 92.1% | 98.8% of 246 | ≥80% support |
| GO | GO:0006402 Biological Process | mRNA catabolic process | 243 / 264 | 92.1% | 98.8% of 246 | ≥80% support |
| Pfam | PF03725 | RNase_PH_C — 3' exoribonuclease family, domain 2 | 200 / 264 | 75.8% | 83.7% of 239 | ≥50% support |
| Pfam | PF03726 | PNPase — Polyribonucleotide nucleotidyltransferase, RNA binding domain | 165 / 264 | 62.5% | 69.0% of 239 | ≥50% support |
| Pfam | PF00575 | S1 | 141 / 264 | 53.4% | 59.0% of 239 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 189 / 264 | 71.6% | 76.8% of 246 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 176 / 264 | 66.7% | 71.5% of 246 | ≥50% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 173 / 264 | 65.5% | 70.3% of 246 | ≥50% support |
| GO | GO:0000965 Biological Process | mitochondrial RNA 3'-end processing | 172 / 264 | 65.2% | 69.9% of 246 | ≥50% support |
| GO | GO:0000958 Biological Process | mitochondrial mRNA catabolic process | 172 / 264 | 65.2% | 69.9% of 246 | ≥50% support |
| KEGG | K00962 | pnp, PNPT1 — Transfer RNA biogenesis | 171 / 264 | 64.8% | 97.7% of 175 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g15255.t1 | NUQ47479.1 | polyribonucleotide nucleotidyltransferase [Phycisphaerae bacterium] | Q8RA43 Polyribonucleotide nucleotidyltransferase OS=Caldanaerobacte | JBrowse |
| Cassiopea xamachana | Cxam_g21944.t1 | MBN2489496.1 | polyribonucleotide nucleotidyltransferase [Planctomycetota bacterium] | A5GF91 Polyribonucleotide nucleotidyltransferase OS=Geotalea uranii | JBrowse |
| Cassiopea xamachana | Cxam_g229.t1 | WP_170396549.1 | MULTISPECIES: polyribonucleotide nucleotidyltransferase [Ruegeria] | Q5LN23 Polyribonucleotide nucleotidyltransferase OS=Ruegeria pomero | JBrowse |
| Cassiopea xamachana | Cxam_g25347.t1 | NOY74511.1 | S1 RNA-binding domain-containing protein [Kiritimatiellota bacterium] | Q87WQ8 Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syr | JBrowse |
