← Back to the gene family browser
This orthogroup contains 202 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 202 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13021 | PRE-MRNA-SPLICING FACTOR ISY1 | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| Pfam | PF06246 | Isy1 | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| GO | GO:0000350 Biological Process | generation of catalytic spliceosome for second transesterification step | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| GO | GO:0000389 Biological Process | mRNA 3'-splice site recognition | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| GO | GO:0000974 Cellular Component | Prp19 complex | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| GO | GO:0071014 Cellular Component | post-mRNA release spliceosomal complex | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| GO | GO:0071020 Cellular Component | post-spliceosomal complex | 177 / 202 | 87.6% | 100.0% of 177 | ≥80% support |
| KEGG | K12870 | ISY1 — Spliceosome | 159 / 202 | 78.7% | 100.0% of 159 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia mediterranea | ENSQPTP00000027253.1 | XP_031557979.1 | pre-mRNA-splicing factor ISY1 homolog [Actinia tenebrosa] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Actinia mediterranea | ENSQPTP00000063726.1 | XP_031557979.1 | pre-mRNA-splicing factor ISY1 homolog [Actinia tenebrosa] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora microphthalma | amic_s0040.g67.t1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora microphthalma | amic_s0040.g67.t2 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora millepora | XP_029185918.2 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora muricata | amur_s0295.g4.t1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000031826.1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q69ZQ2 Pre-mRNA-splicing factor ISY1 homolog OS=Mus musculus OX=100 | JBrowse |
| Astreopora myriophthalma | g21491.t1.1 | none | – | JBrowse | |
| Acropora nasuta | anas_s0036.g2.t1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora nasuta | anas_s0236.g1.t1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora nasuta | anas_s0236.g1.t2 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora palmata | XP_074609743.1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Astrangia poculata | evm.model.Ap10.267 | XP_022796527.1 | pre-mRNA-splicing factor ISY1 homolog [Stylophora pistillata] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora pulchra | FUN_028969-T1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora selago | asel_s0027.g66.t1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Actinernus sp. WN-2022 | Acti_035755-T1 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_20402 | none | – | JBrowse | |
| Aurelia sp. 4 Dawson et al 2005 | ENSDKXP00000014966.1 | none | – | JBrowse | |
| Acropora spathulata | ENSEWQP00005028814.1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
| Acropora spathulata | ENSEWQP00005028826.1 | XP_029185918.2 | pre-mRNA-splicing factor ISY1 homolog [Acropora millepora] | Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus O | JBrowse |
