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This orthogroup contains 182 genes from 12 species (184 sequences — 2 extra sequences share a gene identifier with another member, so they are not counted twice). The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 182 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00078 | RVT_1 — Reverse transcriptase (RNA-dependent DNA polymerase) | 133 / 182 | 73.1% | 79.6% of 167 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 130 / 182 | 71.4% | 82.3% of 158 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alatina alata | Aala_g1001.t1 | XP_047502966.1 | uncharacterized protein LOC125048346 [Penaeus chinensis] | Q5GFD9 Protein IMPACT OS=Rattus norvegicus OX=10116 GN=Impact PE=1 | JBrowse |
| Alatina alata | Aala_g1048.t1 | XP_044165309.1 | uncharacterized protein LOC114973702 [Acropora millepora] | A5PKJ4 Mitogen-activated protein kinase 7 OS=Bos taurus OX=9913 GN= | JBrowse |
| Alatina alata | Aala_g1068.t1 | WBB44924.1 | reverse transcriptase [Chrysogorgia stellata] | E9Q414 Apolipoprotein B-100 OS=Mus musculus OX=10090 GN=Apob PE=1 S | JBrowse |
| Alatina alata | Aala_g1137.t1 | HCX22453.1 | hypothetical protein [Cytophagales bacterium] | P52732 Kinesin-like protein KIF11 OS=Homo sapiens OX=9606 GN=KIF11 | JBrowse |
| Alatina alata | Aala_g114.t1 | PAA94766.1 | hypothetical protein BOX15_Mlig000316g1 [Macrostomum lignano] | Q8NB66 Protein unc-13 homolog C OS=Homo sapiens OX=9606 GN=UNC13C P | JBrowse |
| Alatina alata | Aala_g1145.t1 | XP_047145209.1 | calcium-responsive transcription factor-like [Hydra vulgaris] | Q8N187 Calcium-responsive transcription factor OS=Homo sapiens OX=9 | JBrowse |
| Alatina alata | Aala_g115.t1 | MCP4459908.1 | hypothetical protein [Cytophagales bacterium] | Q9UPW0 Forkhead box protein J3 OS=Homo sapiens OX=9606 GN=FOXJ3 PE= | JBrowse |
| Alatina alata | Aala_g1164.t1 | XP_048576191.1 | uncharacterized protein LOC5508455 [Nematostella vectensis] | Q7TN88 Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Alatina alata | Aala_g1239.t1 | MCP4459908.1 | hypothetical protein [Cytophagales bacterium] | Q9NBX4 Probable RNA-directed DNA polymerase from transposon X-eleme | JBrowse |
| Alatina alata | Aala_g1240.t1 | MCP4490581.1 | DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium] | P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | JBrowse |
| Alatina alata | Aala_g127.t1 | XP_017272617.1 | beta-carotene 15, 15-dioxygenase 2, like [Kryptolebias marmoratus] | Q8HXG8 Carotenoid-cleaving dioxygenase, mitochondrial OS=Macaca fas | JBrowse |
| Alatina alata | Aala_g1303.t1 | XP_031552181.1 | alpha-2-macroglobulin receptor-associated protein-like [Actinia tenebrosa] | Q5GLZ8 Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens O | JBrowse |
| Alatina alata | Aala_g131.t1 | KAI8486269.1 | hypothetical protein Bbelb_359850 [Branchiostoma belcheri] | B1AYB6 Methyl-CpG-binding domain protein 5 OS=Mus musculus OX=10090 | JBrowse |
| Alatina alata | Aala_g1312.t1 | PFX25214.1 | Proteasome activator complex subunit 4B [Stylophora pistillata] | F1QFR9 Proteasome activator complex subunit 4A OS=Danio rerio OX=79 | JBrowse |
| Alatina alata | Aala_g1478.t1 | KAG1670492.1 | Sulfotransferase family cytosolic 2B member 1 [Nymphon striatum] | Q8BUZ3 Tigger transposable element-derived protein 4 OS=Mus musculu | JBrowse |
| Alatina alata | Aala_g1486.t1 | XP_043226451.1 | uncharacterized protein LOC122383765 [Amphibalanus amphitrite] | Q03274 Retrovirus-related Pol polyprotein from type-1 retrotranspos | JBrowse |
| Alatina alata | Aala_g1568.t1 | XP_022793287.1 | titin-like [Stylophora pistillata] | P11009 Creatine kinase S-type, mitochondrial OS=Gallus gallus OX=90 | JBrowse |
| Alatina alata | Aala_g1592.t1 | XP_031561218.1 | putative leucine-rich repeat-containing protein DDB_G0281931 [Actinia tenebrosa] | Q64462 Cytochrome P450 4B1 OS=Mus musculus OX=10090 GN=Cyp4b1 PE=1 | JBrowse |
| Alatina alata | Aala_g16.t1 | XP_020617531.1 | uncharacterized protein LOC110055481 isoform X1 [Orbicella faveolata] | P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | JBrowse |
| Alatina alata | Aala_g1624.t1 | PAA94766.1 | hypothetical protein BOX15_Mlig000316g1 [Macrostomum lignano] | Q95SX7 Probable RNA-directed DNA polymerase from transposon BS OS=D | JBrowse |
