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This orthogroup contains 180 genes from 88 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 180 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 132 / 180 | 73.3% | 99.3% of 133 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 134 / 180 | 74.4% | 100.0% of 134 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 133 / 180 | 73.9% | 99.3% of 134 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0058.g45.t1 | XP_029207407.2 | uncharacterized protein LOC114971048 isoform X4 [Acropora millepora] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora austera | ENSKKQP00000014256.1 | XP_015750762.1 | PREDICTED: polyadenylate-binding protein 5-like isoform X9 [Acropora digitifera] | P32588 Nuclear and cytoplasmic polyadenylated RNA-binding protein P | JBrowse |
| Acropora austera | ENSKKQP00000014264.1 | XP_029207404.2 | uncharacterized protein LOC114971048 isoform X2 [Acropora millepora] | – | JBrowse |
| Acropora austera | ENSKKQP00000014271.1 | XP_029207407.2 | uncharacterized protein LOC114971048 isoform X4 [Acropora millepora] | – | JBrowse |
| Acropora austera | ENSKKQP00000014279.1 | XP_015750764.1 | PREDICTED: polyadenylate-binding protein 5-like isoform X10 [Acropora digitifera] | P32588 Nuclear and cytoplasmic polyadenylated RNA-binding protein P | JBrowse |
| Acropora awi | aawi_s0016.g46.t1 | XP_029207405.2 | uncharacterized protein LOC114971048 isoform X3 [Acropora millepora] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora awi | aawi_s0016.g46.t2 | XP_015750764.1 | PREDICTED: polyadenylate-binding protein 5-like isoform X10 [Acropora digitifera] | – | JBrowse |
| Acropora cervicornis | KAK2567509.1 | XP_029207405.2 | uncharacterized protein LOC114971048 isoform X3 [Acropora millepora] | Q9LIN3 Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thalian | JBrowse |
| Acropora cytherea | acyt_s0004.g26.t1 | XP_029207404.2 | uncharacterized protein LOC114971048 isoform X2 [Acropora millepora] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora cytherea | acyt_s0004.g26.t2 | XP_015750764.1 | PREDICTED: polyadenylate-binding protein 5-like isoform X10 [Acropora digitifera] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora digitifera | chr14Alt.g30931.t1 | none | – | JBrowse | |
| Acropora digitifera | chr14Alt.g30931.t2 | none | – | JBrowse | |
| Acropora digitifera | chr14Alt.g30932.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0001.g382.t1 | XP_029207404.2 | uncharacterized protein LOC114971048 isoform X2 [Acropora millepora] | – | JBrowse |
| Acropora echinata | aech_s0001.g382.t2 | XP_015750764.1 | PREDICTED: polyadenylate-binding protein 5-like isoform X10 [Acropora digitifera] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora florida | aflo_s0126.g61.t1 | XP_029207404.2 | uncharacterized protein LOC114971048 isoform X2 [Acropora millepora] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora florida | aflo_s0126.g61.t2 | XP_029207405.2 | uncharacterized protein LOC114971048 isoform X3 [Acropora millepora] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Acropora florida | aflo_s0126.g61.t3 | XP_015750764.1 | PREDICTED: polyadenylate-binding protein 5-like isoform X10 [Acropora digitifera] | – | JBrowse |
| Acropora gemmifera | agem_s0032.g35.t1 | XP_029207404.2 | uncharacterized protein LOC114971048 isoform X2 [Acropora millepora] | – | JBrowse |
| Acropora gemmifera | agem_s0032.g35.t2 | XP_029207405.2 | uncharacterized protein LOC114971048 isoform X3 [Acropora millepora] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
