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Support counts the member genes carrying the term. % of genes is that count over all 62 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46425 | TRANSCRIPTION TERMINATION FACTOR RHO | 59 / 62 | 95.2% | 100.0% of 59 | ≥80% support |
| Pfam | PF00006 | ATP-synt_ab — ATP synthase alpha/beta family, nucleotide-binding domain | 59 / 62 | 95.2% | 100.0% of 59 | ≥80% support |
| Pfam | PF07497 | Rho_RNA_bind — Rho termination factor, RNA-binding domain | 51 / 62 | 82.3% | 86.4% of 59 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 59 / 62 | 95.2% | 100.0% of 59 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 59 / 62 | 95.2% | 100.0% of 59 | ≥80% support |
| GO | GO:0006353 Biological Process | DNA-templated transcription termination | 59 / 62 | 95.2% | 100.0% of 59 | ≥80% support |
| GO | GO:0008186 Molecular Function | ATP-dependent activity, acting on RNA | 59 / 62 | 95.2% | 100.0% of 59 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 51 / 62 | 82.3% | 86.4% of 59 | ≥80% support |
| KEGG | K03628 | rho — Messenger RNA biogenesis | 51 / 62 | 82.3% | 100.0% of 51 | ≥80% support |
| Pfam | PF07498 | Rho_N — Rho termination factor, N-terminal domain | 37 / 62 | 59.7% | 62.7% of 59 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 43 / 62 | 69.4% | 72.9% of 59 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Calvadosia cruxmelitensis | g256.t1 | OGG94869.1 | flagellar biosynthesis protein FlhF [Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16] | Q01960 Flagellar biosynthesis protein FlhF OS=Bacillus subtilis (st | JBrowse |
| Cassiopea xamachana | Cxam_g10198.t1 | WP_277025701.1 | transcription termination factor Rho, partial [Aurantimonas coralicida] | P52156 Transcription termination factor Rho OS=Cereibacter sphaeroi | JBrowse |
| Cassiopea xamachana | Cxam_g16558.t1 | MBN2489253.1 | transcription termination factor Rho [Planctomycetota bacterium] | P52156 Transcription termination factor Rho OS=Cereibacter sphaeroi | JBrowse |
| Cassiopea xamachana | Cxam_g28421.t1 | WP_171092791.1 | MULTISPECIES: transcription termination factor Rho [unclassified Ruegeria] | P52156 Transcription termination factor Rho OS=Cereibacter sphaeroi | JBrowse |
| Cassiopea xamachana | Cxam_g7735.t1 | MBN2490448.1 | transcription termination factor Rho [Planctomycetota bacterium] | Q1RIJ6 Transcription termination factor Rho OS=Rickettsia bellii (s | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000046944.1 | WP_152285615.1 | transcription termination factor Rho [Flavicella marina] | C7LJY3 Transcription termination factor Rho OS=Karelsulcia muelleri | JBrowse |
| Dendrophyllia cribrosa | g9214.t1.1 | none | – | JBrowse | |
| Hydra oligactis | HOLI00001.G52671 | WP_075802844.1 | transcription termination factor Rho [Pseudomonas putida] | P52155 Transcription termination factor Rho OS=Pseudomonas fluoresc | JBrowse |
| Hydra oligactis | HOLI00002.G18105 | MBA4239975.1 | transcription termination factor Rho [Sphingobacteriaceae bacterium] | C7LJY3 Transcription termination factor Rho OS=Karelsulcia muelleri | JBrowse |
| Hydra oligactis | HOLI00059.G26495 | WP_105259665.1 | transcription termination factor Rho [Rhodoferax sp. TS-BS-61-7] | Q7NXP1 Transcription termination factor Rho OS=Chromobacterium viol | JBrowse |
| Hydra oligactis | HOLI00256.G40529 | TXH94844.1 | transcription termination factor Rho [Rheinheimera sp.] | P0AG32 Transcription termination factor Rho OS=Escherichia coli O15 | JBrowse |
| Hydra oligactis | HOLI00264.G3368 | WP_272547856.1 | MULTISPECIES: transcription termination factor Rho [unclassified Acidovorax] | Q7NXP1 Transcription termination factor Rho OS=Chromobacterium viol | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g02.02360_t1 | MBQ4874611.1 | transcription termination factor Rho [Rickettsiaceae bacterium H1] | P0CH92 Transcription termination factor Rho 1 OS=Ehrlichia chaffeen | JBrowse |
| Hydra viridissima | BRAKERKREP00000023818.1 | WP_012248888.1 | transcription termination factor Rho [Bordetella petrii] | Q7NXP1 Transcription termination factor Rho OS=Chromobacterium viol | JBrowse |
| Hydra viridissima | g20538.t1.1 | none | – | JBrowse | |
| Leptoseris scabra | ANN35178-RA | WP_087459667.1 | transcription termination factor Rho [Oleiphilus messinensis] | Q9HTV1 Transcription termination factor Rho OS=Pseudomonas aerugino | JBrowse |
| Montipora grisea | ANN21023-RA | WP_069471524.1 | transcription termination factor Rho [Candidatus Marithrix sp. Canyon 246] | P52152 Transcription termination factor Rho OS=Allochromatium vinos | JBrowse |
| Montipora grisea | ANN21148-RA | MCP4887688.1 | transcription termination factor Rho [Planctomycetaceae bacterium] | Q1RIJ6 Transcription termination factor Rho OS=Rickettsia bellii (s | JBrowse |
| Montipora grisea | ANN21188-RA | MCP4889193.1 | transcription termination factor Rho [Planctomycetaceae bacterium] | Q7UGV0 Transcription termination factor Rho OS=Rhodopirellula balti | JBrowse |
| Montipora grisea | ANN23250-RA | WP_166988919.1 | transcription termination factor Rho [Pseudomaricurvus alkylphenolicus] | Q9HTV1 Transcription termination factor Rho OS=Pseudomonas aerugino | JBrowse |
