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Support counts the member genes carrying the term. % of genes is that count over all 47 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48077 | TRYPTOPHAN SYNTHASE-RELATED | 44 / 47 | 93.6% | 97.8% of 45 | ≥80% support |
| Pfam | PF00291 | PALP — Pyridoxal-phosphate dependent enzyme | 42 / 47 | 89.4% | 97.7% of 43 | ≥80% support |
| GO | GO:0000162 Biological Process | tryptophan biosynthetic process | 45 / 47 | 95.7% | 97.8% of 46 | ≥80% support |
| GO | GO:0004834 Molecular Function | tryptophan synthase activity | 45 / 47 | 95.7% | 97.8% of 46 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 44 / 47 | 93.6% | 95.7% of 46 | ≥80% support |
| GO | GO:0006568 Biological Process | tryptophan metabolic process | 42 / 47 | 89.4% | 91.3% of 46 | ≥80% support |
| KEGG | K01696 | trpB — Phenylalanine, tyrosine and tryptophan biosynthesis | 32 / 47 | 68.1% | 94.1% of 34 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold10.g25.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold228.g29.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold2649.g2.t1 | none | – | JBrowse | |
| Calvadosia cruxmelitensis | g659.t1 | XP_028514484.1 | fas-binding factor 1 isoform X2 [Exaiptasia diaphana] | A3QF73 Tryptophan synthase beta chain OS=Shewanella loihica (strain | JBrowse |
| Cassiopea xamachana | Cxam_g2209.t1 | WP_180886083.1 | tryptophan synthase subunit beta [Ruegeria sp. THAF57] | Q5LV94 Tryptophan synthase beta chain OS=Ruegeria pomeroyi (strain | JBrowse |
| Hydra oligactis | HOLI00001.G52817 | RWW90844.1 | hypothetical protein BHE74_00022259 [Ensete ventricosum] | Q1IH20 Tryptophan synthase beta chain OS=Pseudomonas entomophila (s | JBrowse |
| Hydra oligactis | HOLI00059.G26278 | WP_142812559.1 | tryptophan synthase subunit beta [Rhodoferax aquaticus] | Q21XI6 Tryptophan synthase beta chain OS=Albidiferax ferrireducens | JBrowse |
| Hydra oligactis | HOLI01423.G1519 | AHV83646.1 | TrpB, partial [Acidovorax oryzae] | A1TLG8 Tryptophan synthase beta chain OS=Paracidovorax citrulli (st | JBrowse |
| Hydra oligactis | HOLI02859.G40011 | WP_031571088.1 | anthranilate synthase component 1 [Pararheinheimera texasensis] | P22099 Anthranilate synthase component 1 OS=Vibrio parahaemolyticus | JBrowse |
| Hydra oligactis | HOLI02859.G40015 | TXH94930.1 | tryptophan synthase subunit beta [Rheinheimera sp.] | Q12LE2 Tryptophan synthase beta chain OS=Shewanella denitrificans ( | JBrowse |
| Hydra oligactis | HOLI02859.G40016 | WP_031571101.1 | tryptophan synthase subunit alpha [Pararheinheimera texasensis] | A7MMG7 Tryptophan synthase alpha chain OS=Cronobacter sakazakii (st | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g02.02155_t1 | WP_028972759.1 | tryptophan synthase subunit beta [Spirochaeta cellobiosiphila] | Q7VGA7 Tryptophan synthase beta chain OS=Helicobacter hepaticus (st | JBrowse |
| Hydra viridissima | BRAKERKREP00000023847.1 | WP_251865576.1 | tryptophan synthase subunit beta [Achromobacter sp. Marseille-Q4962] | Q7WD04 Tryptophan synthase beta chain OS=Bordetella bronchiseptica | JBrowse |
| Hydra viridissima | g20418.t1.1 | none | – | JBrowse | |
| Leptoseris scabra | ANN35011-RA | WP_279788262.1 | tryptophan synthase subunit beta [Pokkaliibacter sp. MBI-7] | Q1H0M1 Tryptophan synthase beta chain OS=Methylobacillus flagellatu | JBrowse |
| Montipora grisea | ANN21032-RA | OAD19085.1 | tryptophan synthase subunit beta [Candidatus Thiomargarita nelsonii] | Q604P3 Tryptophan synthase beta chain OS=Methylococcus capsulatus ( | JBrowse |
| Montipora grisea | ANN21073-RA | MCG8653435.1 | tryptophan synthase subunit beta [Pirellulales bacterium] | Q7UKG9 Tryptophan synthase beta chain OS=Rhodopirellula baltica (st | JBrowse |
| Montipora grisea | ANN21557-RA | MYK18092.1 | tryptophan synthase subunit beta [Candidatus Poribacteria bacterium] | Q8R9M9 Tryptophan synthase beta chain OS=Caldanaerobacter subterran | JBrowse |
| Montipora grisea | ANN21934-RA | MYB01572.1 | tryptophan synthase subunit beta [Candidatus Poribacteria bacterium] | Q8R9M9 Tryptophan synthase beta chain OS=Caldanaerobacter subterran | JBrowse |
| Montipora grisea | ANN22177-RA | MCG9134764.1 | tryptophan synthase subunit beta [Candidatus Poribacteria bacterium] | Q8R9M9 Tryptophan synthase beta chain OS=Caldanaerobacter subterran | JBrowse |
