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This orthogroup contains 32 genes from 8 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 32 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR33823 | RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR DKSA-RELATED | 29 / 32 | 90.6% | 93.6% of 31 | ≥80% support |
| Pfam | PF01258 | zf-dskA_traR — Prokaryotic dksA/traR C4-type zinc finger | 30 / 32 | 93.8% | 96.8% of 31 | ≥80% support |
| Pfam | PF21157 | DksA_CC — DnaK suppressor protein DksA, coiled-coil domain | 27 / 32 | 84.4% | 87.1% of 31 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 31 / 32 | 96.9% | 100.0% of 31 | ≥80% support |
| KEGG | K06204 | dksA — Ribosome biogenesis | 21 / 32 | 65.6% | 100.0% of 21 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold10.g169.t1 | none | – | JBrowse | |
| Calvadosia cruxmelitensis | g1263.t1 | WP_068144960.1 | MULTISPECIES: RNA polymerase-binding protein DksA [Kordiimonas] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Calvadosia cruxmelitensis | g253.t1 | MCG8336451.1 | TraR/DksA family transcriptional regulator [Pseudomonadota bacterium] | Q71X99 ATP-dependent helicase/nuclease subunit A OS=Listeria monocy | JBrowse |
| Cassiopea xamachana | Cxam_g11553.t1 | OJW23003.1 | MAG: transcriptional regulator [Planctomycetales bacterium 71-10] | – | JBrowse |
| Cassiopea xamachana | Cxam_g1536.t1 | SMO37777.1 | transcriptional regulator, TraR/DksA family [Ruegeria faecimaris] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Hydra oligactis | HOLI00001.G52101 | WP_125462558.1 | MULTISPECIES: RNA polymerase-binding protein DksA [Pseudomonas] | P0ABS3 RNA polymerase-binding transcription factor DksA OS=Escheric | JBrowse |
| Hydra oligactis | HOLI00014.G10373 | HCX81080.1 | RNA polymerase-binding protein DksA [Rhodoferax sp.] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Hydra oligactis | HOLI00353.G43251 | WP_245612855.1 | tRNA glutamyl-Q(34) synthetase GluQRS [Pararheinheimera texasensis] | Q8X909 Glutamyl-Q tRNA(Asp) synthetase OS=Escherichia coli O157:H7 | JBrowse |
| Hydra oligactis | HOLI00353.G43304 | WP_031567631.1 | RNA polymerase-binding protein DksA [Pararheinheimera texasensis] | P0ABS3 RNA polymerase-binding transcription factor DksA OS=Escheric | JBrowse |
| Hydra oligactis | HOLI01632.G57129 | KPB17046.1 | Uncharacterized protein AC516_4902 [Pseudomonas amygdali pv. sesami] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Hydra oligactis | HOLI03869.G56424 | PJI99101.1 | TraR/DksA family transcriptional regulator [Acidovorax sp. 69] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g02.02258_t1 | MBQ4874777.1 | TraR/DksA family transcriptional regulator [Rickettsiaceae bacterium H1] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Hydra viridissima | BRAKERKREP00000023593.1 | MBO9352992.1 | RNA polymerase-binding protein DksA [Bordetella petrii] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Hydra viridissima | g20129.t1.1 | none | – | JBrowse | |
| Montipora grisea | ANN20745-RA | STW12516.1 | glutamyl-Q-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis] | Q6D1X9 Glutamyl-Q tRNA(Asp) synthetase OS=Pectobacterium atroseptic | JBrowse |
| Montipora grisea | ANN22314-RA | MAZ87480.1 | RNA polymerase-binding protein DksA [Cellvibrionaceae bacterium] | P0ABS3 RNA polymerase-binding transcription factor DksA OS=Escheric | JBrowse |
| Montipora grisea | ANN24750-RA | WP_249578563.1 | RNA polymerase-binding protein DksA [Limibaculum sediminis] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Montipora grisea | ANN26154-RA | MCG8360445.1 | RNA polymerase-binding protein DksA [Kiloniellales bacterium] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Montipora grisea | ANN28656-RA | NIP30112.1 | hypothetical protein [Candidatus Dadabacteria bacterium] | P0CAU3 RNA polymerase-binding transcription factor DksA OS=Caulobac | JBrowse |
| Montipora grisea | ANN28657-RA | MYB25929.1 | RNA polymerase-binding protein DksA [Candidatus Dadabacteria bacterium] | P43758 RNA polymerase-binding transcription factor DksA OS=Haemophi | JBrowse |
