Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 35 gene–annotation pairs matching PTHR30603 across 148 genomes · 2801 ms.

Species with hits:MGRIS 10HOLIG 9CXAMA 5AAURI2 2CCRUX 2HSYMB 2HIMPE 1HVIRI 1LSCAB 1MVIRU 1TRUBR 1
SpeciesGene IDPANTHER termMatchSourceBrowser
AAURI2scaffold228.g19.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
AAURI2scaffold2648.g2.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CCRUXg1015.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CCRUXg537.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CXAMACxam_g10693.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CXAMACxam_g16054.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CXAMACxam_g879.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CXAMACxam_g19232.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
CXAMACxam_g21211.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HIMPEevm.model.Contig136.38PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI02858.G48417PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00002.G20008PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00001.G52403PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00353.G43124PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00002.G20773PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00150.G2065PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI03692.G28518PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00001.G54019PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HOLIGHOLI00150.G2249PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HSYMBHSymV2.0_g02.02355_t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HSYMBHSymV2.0_g18.25763_t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
HVIRIBRAKERKREP00000022387.1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
LSCABANN35065-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN35275-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN20731-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN22588-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN27083-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN32715-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN30204-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN27508-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN25128-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN40172-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MGRISANN24719-RAPTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
MVIRUscaffold121.g266.t1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse
TRUBRBRAKERIOWP00000001495.1PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscanJBrowse

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