Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF00218 across 148 genomes · 6991 ms.

Species with hits:HOLIG 6CCRUX 1CXAMA 1HSYMB 1HVIRI 1MGRIS 1MVIRU 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg660.t1PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
CXAMACxam_g1396.t1PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HOLIGHOLI02859.G40014PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HOLIGHOLI02859.G40013PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HOLIGHOLI01498.G36420PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HOLIGHOLI01498.G36419PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HOLIGHOLI00001.G52372PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HOLIGHOLI00014.G9377PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HSYMBHSymV2.0_g02.02156_t1PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
HVIRIBRAKERKREP00000023581.1PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
MGRISANN28780-RAPF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse
MVIRUscaffold121.g127.t1PF00218Indole-3-glycerol phosphate synthaseInterproscanJBrowse

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