Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF00712 across 148 genomes · 8661 ms.

Species with hits:HOLIG 6MGRIS 4CXAMA 2HSYMB 2HVIRI 2CCRUX 1LSCAB 1MVIRU 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg290.t1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
CXAMACxam_g5491.t1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
CXAMACxam_g13227.t1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HOLIGHOLI00014.G9858PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HOLIGHOLI00002.G20741PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HOLIGHOLI00643.G15877PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HOLIGHOLI00001.G52846PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HOLIGHOLI00256.G40368PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HOLIGHOLI00691.G35182PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02807_t1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02050_t1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HVIRIg20041.t1.1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
HVIRIBRAKERKREP00000023252.1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
LSCABANN35280-RAPF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
MGRISANN33806-RAPF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
MGRISANN25773-RAPF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
MGRISANN32897-RAPF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
MGRISANN36569-RAPF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse
MVIRUscaffold121.g143.t1PF00712DNA polymerase III beta subunit, N-terminal domainInterproscanJBrowse

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