Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 31 gene–annotation pairs matching PF01225 across 148 genomes · 24 ms.

Species with hits:Hydra oligactis 11Cassiopea xamachana 4Hydra viridissima 4Montipora grisea 4Calvadosia cruxmelitensis 2Hydractinia symbiolongicarpus 2Madracis senaria 2Leptoseris scabra 1Palythoa mizigama 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg270.t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Calvadosia cruxmelitensisg268.t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3020.t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3019.t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Cassiopea xamachanaCxam_g755.t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Cassiopea xamachanaCxam_g9547.t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20759PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52244PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10384PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20226PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00002.G18686PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10398PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51843PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51843PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00592.G59052PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI03869.G56418PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51838PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02584_t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02740_t1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023931.1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023835.1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023719.1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023719.1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Leptoseris scabraANN35463-RAPF01225Mur ligase family, catalytic domainInterproscanJBrowse
Montipora griseaANN20794-RAPF01225Mur ligase family, catalytic domainInterproscanJBrowse
Montipora griseaANN26612-RAPF01225Mur ligase family, catalytic domainInterproscanJBrowse
Montipora griseaANN27095-RAPF01225Mur ligase family, catalytic domainInterproscanJBrowse
Montipora griseaANN31238-RAPF01225Mur ligase family, catalytic domainInterproscanJBrowse
Madracis senariaENSVTRP00000021860.1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Madracis senariaENSVTRP00000021851.1PF01225Mur ligase family, catalytic domainInterproscanJBrowse
Palythoa mizigamac2643.g007.t1.p1PF01225Mur ligase family, catalytic domainInterproscanJBrowse

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