Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 26 gene–annotation pairs matching PF01656 across 148 genomes · 31 ms.

Species with hits:Hydra oligactis 10 Cassiopea xamachana 2 Montipora efflorescens 2 Acropora acuminata 1 Aurelia aurita complex sp. Pacific 1 Acropora millepora 1 Acropora pulchra 1 Acropora selago 1 Exaiptasia diaphana 1 Hydra viridissima 1 Montipora capitata 1 Meandrina meandrites 1 Porites lobata 1 Palythoa mizigama 1 Siderastrea radians 1

Species	Gene ID	Pfam term	Match	Source	Browser
Acropora acuminata	aacu_s0141.g36.t1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold1725.g1.t1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Acropora millepora	XP_044168494.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Acropora pulchra	FUN_023053-T1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Acropora selago	asel_s0299.g21.t1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g2422.t1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g2438.t1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Exaiptasia diaphana	KXJ05643.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00691.G35159	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00150.G2009	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI03798.G33154	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI03798.G33199	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00059.G25842	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00150.G2388	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G10462	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00264.G3068	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G17702	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra oligactis	HOLI00504.G55179	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000022579.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Montipora capitata	g21652.t1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Montipora efflorescens	ENSTIFP00000018093.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Montipora efflorescens	ENSTIFP00000010579.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Meandrina meandrites	ENSVBPP00000020041.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Porites lobata	ENSNQRP00000004634.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Palythoa mizigama	c2948.g010.t1.p1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse
Siderastrea radians	ENSTHXP00000009033.1	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	Interproscan	JBrowse