Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF08883 across 148 genomes · 25 ms.

Species with hits:Chrysaora quinquecirrha 2Hydra oligactis 2Pelagia noctiluca 2Scolanthus callimorphus 2Sanderia malayensis 2Aurelia aurita 1Aurelia aurita complex sp. Pacific 1Actinernus sp. WN-2022 1Aurelia sp. 4 Dawson et al 2005 1Anthopleura xanthogrammica 1Catostylus mosaicus 1Nemopilema nomurai 1Plumapathes pennacea 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia auritascaffold139.g45.t1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold885.g7.t1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Actinernus sp. WN-2022Acti_003331-T1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000025193.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Anthopleura xanthogrammicaENSOJPP00000004099.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Catostylus mosaicusENSSJYP00000008574.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Chrysaora quinquecirrhaevm.model.HiC_scaffold_2.448PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Chrysaora quinquecirrhaevm.model.HiC_scaffold_2.449PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Hydra oligactisHOLI00001.G52818PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Hydra oligactisHOLI00001.G53574PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Nemopilema nomuraiBRAKERMNPP00000010497.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Pelagia noctilucaENSXLYP00000008704.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Pelagia noctilucaENSXLYP00000010900.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Plumapathes pennaceaENSDKPP00000019783.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.32528.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.8086.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Sanderia malayensisENSXQXP00000005774.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse
Sanderia malayensisENSXQXP00000005017.1PF08883Dopa 4,5-dioxygenase familyInterproscanJBrowse

TOP