Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 15 gene–annotation pairs matching PF13525 across 148 genomes · 27 ms.

Species with hits:Hydra oligactis 4Calvadosia cruxmelitensis 2Cassiopea xamachana 2Montipora grisea 2Aurelia aurita complex sp. Pacific 1Hydractinia symbiolongicarpus 1Hydra viridissima 1Micromussa lordhowensis 1Morbakka virulenta 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold2215.g1.t1PF13525Outer membrane lipoproteinInterproscanJBrowse
Calvadosia cruxmelitensisg1148.t1PF13525Outer membrane lipoproteinInterproscanJBrowse
Calvadosia cruxmelitensisg1204.t1PF13525Outer membrane lipoproteinInterproscanJBrowse
Cassiopea xamachanaCxam_g762.t1PF13525Outer membrane lipoproteinInterproscanJBrowse
Cassiopea xamachanaCxam_g11563.t1PF13525Outer membrane lipoproteinInterproscanJBrowse
Hydra oligactisHOLI00353.G42841PF13525Outer membrane lipoproteinInterproscanJBrowse
Hydra oligactisHOLI00655.G56839PF13525Outer membrane lipoproteinInterproscanJBrowse
Hydra oligactisHOLI00002.G19206PF13525Outer membrane lipoproteinInterproscanJBrowse
Hydra oligactisHOLI00001.G52068PF13525Outer membrane lipoproteinInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02238_t1PF13525Outer membrane lipoproteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022570.1PF13525Outer membrane lipoproteinInterproscanJBrowse
Montipora griseaANN24847-RAPF13525Outer membrane lipoproteinInterproscanJBrowse
Montipora griseaANN24847-RAPF13525Outer membrane lipoproteinInterproscanJBrowse
Micromussa lordhowensisENSSYXP00000010086.1PF13525Outer membrane lipoproteinInterproscanJBrowse
Morbakka virulentascaffold121.g329.t1PF13525Outer membrane lipoproteinInterproscanJBrowse

TOP