Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF18379 across 148 genomes · 21 ms.

Species with hits:Catalaphyllia jardinei 1Cyphastrea salae 1Madracis auretenra 1Orbicella faveolata 1Pocillopora acuta 1Porites australiensis 1Pocillopora damicornis 1Pocillopora meandrina 1Plumapathes pennacea 1Porites rus 1Platygyra sinensis 1Pocillopora verrucosa 1Rhodactis osculifera 1Turbinaria reniformis 1
SpeciesGene IDPfam termMatchSourceBrowser
Catalaphyllia jardineiENSAVKP00000033258.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Cyphastrea salaeENSOFVP00000026390.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Madracis auretenraENSIHXP00000019853.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Orbicella faveolataXP_020627725.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g14175.t1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Porites australiensispaus_s0568.g1.t1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Pocillopora damicornisRMX60808.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Pocillopora meandrinaCAH3043697.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Plumapathes pennaceaENSDKPP00000038461.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Porites rusENSGYQP00005037167.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Platygyra sinensisevm.model.scaffold_55648.13PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Pocillopora verrucosaXP_058972250.2PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000027651.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse
Turbinaria reniformisENSHNZP00000025550.1PF18379FERM F1 ubiquitin-like domainInterproscanJBrowse

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