← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 221 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15067 | E3 UBIQUITIN-PROTEIN LIGASE RNF8 | 183 / 221 | 82.8% | 100.0% of 183 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 183 / 221 | 82.8% | 96.3% of 190 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 183 / 221 | 82.8% | 96.3% of 190 | ≥80% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 183 / 221 | 82.8% | 96.3% of 190 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 183 / 221 | 82.8% | 96.3% of 190 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 183 / 221 | 82.8% | 96.3% of 190 | ≥80% support |
| GO | GO:0070936 Biological Process | protein K48-linked ubiquitination | 183 / 221 | 82.8% | 96.3% of 190 | ≥80% support |
| GO | GO:0005783 Cellular Component | endoplasmic reticulum | 182 / 221 | 82.4% | 95.8% of 190 | ≥80% support |
| GO | GO:0030968 Biological Process | endoplasmic reticulum unfolded protein response | 182 / 221 | 82.4% | 95.8% of 190 | ≥80% support |
| Pfam | PF02845 | CUE | 174 / 221 | 78.7% | 93.1% of 187 | ≥50% support |
| Pfam | PF13639 | zf-RING_2 — Ring finger domain | 171 / 221 | 77.4% | 91.4% of 187 | ≥50% support |
| GO | GO:0043130 Molecular Function | ubiquitin binding | 176 / 221 | 79.6% | 92.6% of 190 | ≥50% support |
| KEGG | K10636 | AMFR, GP78 — Ubiquitin system | 134 / 221 | 60.6% | 98.5% of 136 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora selago | asel_s0003.g30.t2 | XP_029200543.2 | uncharacterized protein LOC114965120 [Acropora millepora] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Acropora selago | asel_s1657.g1.t1 | XP_029200546.2 | E3 ubiquitin-protein ligase AMFR-like [Acropora millepora] | Q9R049 E3 ubiquitin-protein ligase AMFR OS=Mus musculus OX=10090 GN | JBrowse |
| Actinernus sp. WN-2022 | Acti_002210-T1 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_18953 | none | – | JBrowse | |
| Aurelia sp. 4 Dawson et al 2005 | ENSDKXP00000023086.1 | none | – | JBrowse | |
| Aurelia sp. 4 Dawson et al 2005 | ENSDKXP00000023095.1 | none | – | JBrowse | |
| Acropora spathulata | ENSEWQP00005043541.1 | XP_029200546.2 | E3 ubiquitin-protein ligase AMFR-like [Acropora millepora] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Acropora spathulata | ENSEWQP00005043553.1 | RMX49781.1 | hypothetical protein pdam_00009110 [Pocillopora damicornis] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Actinia tenebrosa | XP_031572327.1 | XP_031572327.1 | E3 ubiquitin-protein ligase AMFR-like isoform X1 [Actinia tenebrosa] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Actinia tenebrosa | XP_031572336.1 | XP_031572336.1 | E3 ubiquitin-protein ligase AMFR-like isoform X2 [Actinia tenebrosa] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Actinia tenebrosa | XP_031572346.1 | XP_031572346.1 | E3 ubiquitin-protein ligase AMFR-like isoform X3 [Actinia tenebrosa] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Acropora tenuis | aten_s0050.g41.t1 | XP_029200546.2 | E3 ubiquitin-protein ligase AMFR-like [Acropora millepora] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000012200.1 | XP_031572346.1 | E3 ubiquitin-protein ligase AMFR-like isoform X3 [Actinia tenebrosa] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000012205.1 | XP_031572346.1 | E3 ubiquitin-protein ligase AMFR-like isoform X3 [Actinia tenebrosa] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Acropora yongei | ayon_s0013.g371.t1 | XP_029200546.2 | E3 ubiquitin-protein ligase AMFR-like [Acropora millepora] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Bougainvillia cf. muscus | g42193.t1 | none | – | JBrowse | |
| Blastomussa wellsi | BRAKERLUSP00000004681.1 | XP_022804848.1 | E3 ubiquitin-protein ligase AMFR-like [Stylophora pistillata] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Blastomussa wellsi | g23401.t1.1 | none | – | JBrowse | |
| Candelabrum cocksii | ENSQNNP00000002079.1 | XP_047126317.1 | E3 ubiquitin-protein ligase AMFR-like [Hydra vulgaris] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
| Candelabrum cocksii | ENSQNNP00000002092.1 | XP_047126317.1 | E3 ubiquitin-protein ligase AMFR-like [Hydra vulgaris] | F1QB30 E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=a | JBrowse |
