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Support counts the member genes carrying the term. % of genes is that count over all 191 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23338 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| Pfam | PF01423 | LSM | 164 / 191 | 85.9% | 100.0% of 164 | ≥80% support |
| GO | GO:0000387 Biological Process | spliceosomal snRNP assembly | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0000932 Cellular Component | P-body | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0005688 Cellular Component | U6 snRNP | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0006396 Biological Process | RNA processing | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0017070 Molecular Function | U6 snRNA binding | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0033962 Biological Process | P-body assembly | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0097526 Cellular Component | spliceosomal tri-snRNP complex | 167 / 191 | 87.4% | 100.0% of 167 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 166 / 191 | 86.9% | 99.4% of 167 | ≥80% support |
| GO | GO:0000956 Biological Process | nuclear-transcribed mRNA catabolic process | 166 / 191 | 86.9% | 99.4% of 167 | ≥80% support |
| KEGG | K12623 | LSM4 — Spliceosome | 165 / 191 | 86.4% | 100.0% of 165 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Siderastrea radians | ENSTHXP00000016244.1 | none | – | JBrowse | |
| Siderastrea siderea | FUN_025565-T1 | none | – | JBrowse | |
| Tubastraea coccinea | TcoG024999.mRNA1 | none | – | JBrowse | |
| Turritopsis dohrnii | Tur_r2.0_p0263.1.g52589.t1 | none | – | JBrowse | |
| Thelohanellus kitauei | KII70419.1 | none | – | JBrowse | |
| Tripedalia maipoensis | g11125.t1 | none | – | JBrowse | |
| Turbinaria reniformis | ENSHNZP00000009035.1 | none | – | JBrowse | |
| Turritopsis rubra | BRAKERIOWP00000005804.1 | none | – | JBrowse | |
| Turritopsis rubra | g10650.t1.1 | none | – | JBrowse | |
| Telmatactis stephensoni | BRAKERFUXP00000047959.1 | none | – | JBrowse | |
| Xenia sp. Carnegie-2017 | XP_046851998.1 | none | – | JBrowse |
