Gene Family

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Member genes
191
Species
129
Sequences
191
Best annotation support
87.4%

Consensus functional annotation

No term is shared by every member gene — the best-supported term below covers 87.4% of the 191 members.

Support counts the member genes carrying the term. % of genes is that count over all 191 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.

Source Term Name / description Support % of genes % annotated Consistency
PANTHERPTHR23338SMALL NUCLEAR RIBONUCLEOPROTEIN SM167 / 19187.4%100.0%
of 167
≥80% support
PfamPF01423LSM164 / 19185.9%100.0%
of 164
≥80% support
GOGO:0000387
Biological Process
spliceosomal snRNP assembly167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0000932
Cellular Component
P-body167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0003723
Molecular Function
RNA binding167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0005688
Cellular Component
U6 snRNP167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0006396
Biological Process
RNA processing167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0017070
Molecular Function
U6 snRNA binding167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0033962
Biological Process
P-body assembly167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0097526
Cellular Component
spliceosomal tri-snRNP complex167 / 19187.4%100.0%
of 167
≥80% support
GOGO:0000398
Biological Process
mRNA splicing, via spliceosome166 / 19186.9%99.4%
of 167
≥80% support
GOGO:0000956
Biological Process
nuclear-transcribed mRNA catabolic process166 / 19186.9%99.4%
of 167
≥80% support
KEGGK12623LSM4 — Spliceosome165 / 19186.4%100.0%
of 165
≥80% support
📊 Total members in OG0007837: 191
Show: genes per page

Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.

Species Gene ID Top NCBI-NR hit
(accession)
Top NCBI-NR hit description
(source organism)
Top UniProt hit
(Swiss-Prot)
Genome browser
Porites compressaPorites_compressa_HIv1___RNAseq.g40710.t1noneJBrowse
Podabacia crustaceaPcrG010135.mRNA1noneJBrowse
Porites cylindricaENSZOFP00000014323.1noneJBrowse
Pocillopora damicornisRMX58000.1noneJBrowse
Porites divaricataENSHHBP00000009137.1noneJBrowse
Porites divaricataENSHHBP00000009144.1noneJBrowse
Porites evermanniCAH3159470.1noneJBrowse
Pteroeides griseumENSPYFP00000019177.1noneJBrowse
Pteroeides griseumENSPYFP00000019188.1noneJBrowse
Pteroeides griseumENSPYFP00000019199.1noneJBrowse
Porites harrisoniKAM7444641.1noneJBrowse
Porites lobataENSNQRP00000004660.1noneJBrowse
Porites lobataENSNQRP00000004672.1noneJBrowse
Porites lobataENSNQRP00000004676.1noneJBrowse
Porites luteaXP_073259504.1noneJBrowse
Pocillopora meandrinaCAH3115926.1noneJBrowse
Palythoa mizigamac0374.g016.t1.p1CAH3159470.1unnamed protein product, partial [Porites evermanni]Q3ZBK6
U6 snRNA-associated Sm-like protein LSm4 OS=Bos taurus OX=99
JBrowse
Pelagia noctilucaENSXLYP00000026462.1XP_012524117.1U6 snRNA-associated Sm-like protein LSm4 [Monomorium pharaonis]Q3ZBK6
U6 snRNA-associated Sm-like protein LSm4 OS=Bos taurus OX=99
JBrowse
Pelagia noctilucaENSXLYP00000026474.1XP_014223476.1U6 snRNA-associated Sm-like protein LSm4 [Trichogramma pretiosum]Q3ZBK6
U6 snRNA-associated Sm-like protein LSm4 OS=Bos taurus OX=99
JBrowse
Paragorgia papillataPpa0G020080XP_028404733.1U6 snRNA-associated Sm-like protein LSm4 [Dendronephthya gigantea]Q9QXA5
U6 snRNA-associated Sm-like protein LSm4 OS=Mus musculus OX=
JBrowse
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