Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 97 gene–annotation pairs matching PF02796 across 148 genomes · 6488 ms.

Species with hits:CSP1 15BWELL 10PPAPI 8PLUTE 7PCLAV 5ECAVO 5TSP 3ADIGI 3HVIRI 3HIMPE 3MSENI 2HOLIG 2EHORR 2EVERR 2CGRAC2 2CSALA 2MMURI 1TCOCC 1ACERV 1AMYRI 1PHARR 1PGRIS 1PCRUS 1PCOMP 1ANASU 1ASP1 1MEFFL 1MLORD 1DCRIB 1MAURE 1LSCAB 1ASPAT 1CJARD 1FANCO 1AAUST 1CNATA 1CQUIN 1DGIGA 1AAURI1 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold26.g16.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
AAUSTENSKKQP00000010303.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ACERVKAK2564519.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ADIGIg30219.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ADIGIg21959.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ADIGIg8907.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
AMYRIBRAKERYMEP00000018013.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ANASUanas_s0079.g11.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ASP1Acti_038229-T1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ASPATENSEWQP00005043109.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000013868.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000014010.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000001541.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000004510.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000002700.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000014433.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000013050.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000012652.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000021593.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
BWELLBRAKERLUSP00000002512.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CGRAC2BRAKERTYJP00000017864.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CGRAC2BRAKERTYJP00000056194.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CJARDENSAVKP00000019048.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CNATAFUN_030771-T1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CQUINevm.model.HiC_scaffold_321.84PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSALAENSOFVP00000030001.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSALAENSOFVP00000007928.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G092760PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G292090PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G063250PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G243360PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G044040PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G244790PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G384580PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G242300PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G495870PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G386700PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G431290PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G496950PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G319080PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G243770PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
CSP1Csp0G452530PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
DCRIBBRAKERRLHP00000041267.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
DGIGAXP_028400815.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ECAVOENSLDHP00000046672.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ECAVOENSLDHP00000022344.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ECAVOENSLDHP00000000103.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ECAVOENSLDHP00000022327.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
ECAVOENSLDHP00000014066.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
EHORRENSJVNP00000044064.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
EHORRENSJVNP00000005662.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
EVERRENSNOVP00005034926.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
EVERRENSNOVP00005026607.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
FANCOeanc_s005.g0070.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HIMPEevm.model.Chr05.1442PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HIMPEevm.model.Chr03.2399PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HIMPEevm.model.Chr13.464PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HOLIGHOLI00592.G58784PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HOLIGHOLI00592.G58791PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HVIRIBRAKERKREP00000024832.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HVIRIBRAKERKREP00000024789.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
HVIRIBRAKERKREP00000024804.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
LSCABANN24708-RAPF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
MAUREENSIHXP00000025829.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
MEFFLENSTIFP00000019894.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
MLORDENSSYXP00000036282.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
MMURIBRAKERXEIP00000036907.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
MSENIENSDTNP00000031653.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
MSENIENSDTNP00000030768.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCLAVCAB4041711.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCLAVCAB3983978.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCLAVCAB3993256.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCLAVCAB4010368.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCLAVCAB4035809.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCOMPPorites_compressa_HIv1___TS.g28766.t1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PCRUSPcrG019478.mRNA1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PGRISENSPYFP00000036266.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PHARRKAM7433086.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258758.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258759.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258757.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258752.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258755.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258756.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PLUTEXP_073258753.1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G416230PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G331220PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G094000PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G170080PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G173820PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G284750PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G052280PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
PPAPIPpa0G321900PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
TCOCCTcoG035507.mRNA1PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
TSPClavulariidae_g9474PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
TSPClavulariidae_g1044PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse
TSPClavulariidae_g23193PF02796Helix-turn-helix domain of resolvaseInterproscanJBrowse

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