Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF02938 across 148 genomes · 7449 ms.

Species with hits:HIMPE 4HOLIG 4CCRUX 2CXAMA 2HVIRI 2AAURI2 1CSP1 1HSYMB 1MVIRU 1TSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold7053.g2.t1PF02938GAD domainInterproscanJBrowse
CCRUXg366.t1PF02938GAD domainInterproscanJBrowse
CCRUXg1423.t1PF02938GAD domainInterproscanJBrowse
CSP1Csp0G128830PF02938GAD domainInterproscanJBrowse
CXAMACxam_g610.t1PF02938GAD domainInterproscanJBrowse
CXAMACxam_g13441.t1PF02938GAD domainInterproscanJBrowse
HIMPEevm.model.Contig130.6PF02938GAD domainInterproscanJBrowse
HIMPEevm.model.Contig147.9PF02938GAD domainInterproscanJBrowse
HIMPEevm.model.Contig123.65PF02938GAD domainInterproscanJBrowse
HIMPEevm.model.Contig136.48PF02938GAD domainInterproscanJBrowse
HOLIGHOLI00059.G25883PF02938GAD domainInterproscanJBrowse
HOLIGHOLI00002.G17347PF02938GAD domainInterproscanJBrowse
HOLIGHOLI00504.G55038PF02938GAD domainInterproscanJBrowse
HOLIGHOLI00353.G42852PF02938GAD domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02799_t1PF02938GAD domainInterproscanJBrowse
HVIRIg20108.t1.1PF02938GAD domainInterproscanJBrowse
HVIRIBRAKERKREP00000023702.1PF02938GAD domainInterproscanJBrowse
MVIRUscaffold121.g326.t1PF02938GAD domainInterproscanJBrowse
TSPClavulariidae_g13213PF02938GAD domainInterproscanJBrowse

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