Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 39 gene–annotation pairs matching PF02939 across 148 genomes · 6280 ms.

Species with hits:DCRIB 2MCACT 2AEQUI 2AMYRI 2HVIRI 2HOCTO 2AALAT 1MVIRU 1PACUT 1PCRUS 1PHARR 1PDAMI 1MMURI 1PSINE1 1PSPEC 1PXISH 1TCOCC 1TMAIP 1MPAPU 1LSCAB 1MGRIS 1MCAPI 1ACERV 1HOLIG 1HIMPE 1GFASC 1CGRAC2 1CCRUX 1BCFM 1ASELA 1ALIUI 1ACOER 1TSTEP 1
SpeciesGene IDPfam termMatchSourceBrowser
AALATAala_g2351.t1PF02939UcrQ familyInterproscanJBrowse
ACERVKAK2563360.1PF02939UcrQ familyInterproscanJBrowse
ACOERevm.model.ptg000037l.46PF02939UcrQ familyInterproscanJBrowse
AEQUIEGACTEQ4350052655-PAPF02939UcrQ familyInterproscanJBrowse
AEQUIEGACTEQ4350004062-PAPF02939UcrQ familyInterproscanJBrowse
ALIUIgene04974.t1PF02939UcrQ familyInterproscanJBrowse
AMYRIBRAKERYMEP00000020128.1PF02939UcrQ familyInterproscanJBrowse
AMYRIg15040.t1.1PF02939UcrQ familyInterproscanJBrowse
ASELAasel_s0352.g16.t1PF02939UcrQ familyInterproscanJBrowse
BCFMM_g24151.t1PF02939UcrQ familyInterproscanJBrowse
CCRUXg3.t1PF02939UcrQ familyInterproscanJBrowse
CGRAC2BRAKERTYJP00000033762.1PF02939UcrQ familyInterproscanJBrowse
DCRIBg14914.t1.1PF02939UcrQ familyInterproscanJBrowse
DCRIBBRAKERRLHP00000021246.1PF02939UcrQ familyInterproscanJBrowse
GFASCgfas1.m1.8057.m1PF02939UcrQ familyInterproscanJBrowse
HIMPEevm.model.Chr01.514PF02939UcrQ familyInterproscanJBrowse
HOCTOBRAKERHOCP00005006808.1PF02939UcrQ familyInterproscanJBrowse
HOCTOg2684.t1.1PF02939UcrQ familyInterproscanJBrowse
HOLIGHOLI00933.G45201PF02939UcrQ familyInterproscanJBrowse
HVIRIBRAKERKREP00000026524.1PF02939UcrQ familyInterproscanJBrowse
HVIRIg13260.t1.1PF02939UcrQ familyInterproscanJBrowse
LSCABANN23916-RAPF02939UcrQ familyInterproscanJBrowse
MCACTBRAKERNUSP00000020291.1PF02939UcrQ familyInterproscanJBrowse
MCACTg32147.t1.1PF02939UcrQ familyInterproscanJBrowse
MCAPIg33910.t1PF02939UcrQ familyInterproscanJBrowse
MGRISANN41274-RAPF02939UcrQ familyInterproscanJBrowse
MMURIBRAKERXEIP00000039062.1PF02939UcrQ familyInterproscanJBrowse
MPAPUBRAKERKYLP00000020248.1PF02939UcrQ familyInterproscanJBrowse
MVIRUscaffold26.g21.t1PF02939UcrQ familyInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___TS.g10425.t1PF02939UcrQ familyInterproscanJBrowse
PCRUSPcrG005024.mRNA1PF02939UcrQ familyInterproscanJBrowse
PDAMIRMX52739.1PF02939UcrQ familyInterproscanJBrowse
PHARRKAM7427728.1PF02939UcrQ familyInterproscanJBrowse
PSINE1g14741.t1PF02939UcrQ familyInterproscanJBrowse
PSPECpspe_0.1.m1.68668.m1PF02939UcrQ familyInterproscanJBrowse
PXISHHK74SY85_g1884PF02939UcrQ familyInterproscanJBrowse
TCOCCTcoG021521.mRNA1PF02939UcrQ familyInterproscanJBrowse
TMAIPg3198.t1PF02939UcrQ familyInterproscanJBrowse
TSTEPBRAKERFUXP00000045162.1PF02939UcrQ familyInterproscanJBrowse

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