Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 28 gene–annotation pairs matching PF03120 across 148 genomes · 8468 ms.

Species with hits:MGRIS 8HOLIG 5CXAMA 2DCRIB 2HSYMB 2HVIRI 2TRUBR 2CCRUX 1CSP1 1MHONG 1MVIRU 1PMIZI 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg1204.t1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
CSP1Csp0G407550PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
CXAMACxam_g5320.t1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
CXAMACxam_g1221.t1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
DCRIBBRAKERRLHP00000046941.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
DCRIBg9250.t1.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HOLIGHOLI00001.G53267PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HOLIGHOLI00353.G42758PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HOLIGHOLI00001.G49191PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HOLIGHOLI00002.G19024PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HOLIGHOLI00459.G54340PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02262_t1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HSYMBHSymV2.0_g21.25803_t1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HVIRIg20404.t1.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
HVIRIBRAKERKREP00000023314.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN39190-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN24846-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN27740-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN25893-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN26104-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN29833-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN33349-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MGRISANN40610-RAPF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MHONGEVM0010828.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
MVIRUscaffold121.g25.t1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
PMIZIc1137.g005.t1.p1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
TRUBRBRAKERIOWP00000004355.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse
TRUBRg10884.t1.1PF03120NAD-dependent DNA ligase OB-fold domainInterproscanJBrowse

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