Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching PF04085 across 148 genomes · 18 ms.

Species with hits:Hydra oligactis 5Montipora grisea 3Morbakka virulenta 2Aurelia aurita complex sp. Pacific 1Cassiopea xamachana 1Hemicorallium imperiale 1Hydractinia symbiolongicarpus 1Hydra viridissima 1Leptoseris scabra 1Trachythela sp. YZ-2020 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g240.t1PF04085rod shape-determining protein MreCInterproscanJBrowse
Cassiopea xamachanaCxam_g4141.t1PF04085rod shape-determining protein MreCInterproscanJBrowse
Hemicorallium imperialeevm.model.Contig133.248PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydra oligactisHOLI00001.G53798PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydra oligactisHOLI00256.G40673PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydra oligactisHOLI00014.G9567PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydra oligactisHOLI00823.G35904PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydra oligactisHOLI00002.G20115PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02696_t1PF04085rod shape-determining protein MreCInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022614.1PF04085rod shape-determining protein MreCInterproscanJBrowse
Leptoseris scabraANN35037-RAPF04085rod shape-determining protein MreCInterproscanJBrowse
Montipora griseaANN29891-RAPF04085rod shape-determining protein MreCInterproscanJBrowse
Montipora griseaANN33983-RAPF04085rod shape-determining protein MreCInterproscanJBrowse
Montipora griseaANN31309-RAPF04085rod shape-determining protein MreCInterproscanJBrowse
Morbakka virulentascaffold121.g273.t1PF04085rod shape-determining protein MreCInterproscanJBrowse
Morbakka virulentascaffold121.g273.t1PF04085rod shape-determining protein MreCInterproscanJBrowse
Trachythela sp. YZ-2020Clavulariidae_g13556PF04085rod shape-determining protein MreCInterproscanJBrowse

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