Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 48 gene–annotation pairs matching PF04484 across 148 genomes · 8183 ms.

Species with hits:TSTEP 2HOCTO 2AAURI2 2MSENI 2NVECT 2PMIZI 2AEQUI 2AMEDI 2HVIRI 2PSINE1 1PPENN 1PPAPI 1PUMBR 1PXISH 1MPAPU 1MMURI 1MDICH 1MCOMP 1MALCI 1LSARM 1SCALL 1AAURI1 1HIMPE 1CCOCK 1ACOER 1AIDSS 1ALIUI 1ASP1 1ASP3 1AXANT 1CGIGA 1EVERR 1CGRAC1 1CMOSA 1CQUIN 1CSP1 1DLINE 1ECAVO 1HCOER 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold80.g3.t1PF04484QWRF familyInterproscanJBrowse
AAURI2scaffold1784.g4.t1PF04484QWRF familyInterproscanJBrowse
AAURI2scaffold1784.g4.t2PF04484QWRF familyInterproscanJBrowse
ACOERevm.model.ptg000027l.334PF04484QWRF familyInterproscanJBrowse
AEQUIEGACTEQ4350047369-PAPF04484QWRF familyInterproscanJBrowse
AEQUIEGACTEQ4350017362-PAPF04484QWRF familyInterproscanJBrowse
AIDSSalvinactis_v1_g26682PF04484QWRF familyInterproscanJBrowse
ALIUIgene18334.t1PF04484QWRF familyInterproscanJBrowse
AMEDIENSQPTP00000002587.1PF04484QWRF familyInterproscanJBrowse
AMEDIENSQPTP00000043962.1PF04484QWRF familyInterproscanJBrowse
ASP1Acti_008055-T1PF04484QWRF familyInterproscanJBrowse
ASP34_ENSDKXP00000005802.1PF04484QWRF familyInterproscanJBrowse
AXANTENSOJPP00000027381.1PF04484QWRF familyInterproscanJBrowse
CCOCKENSQNNP00000019614.1PF04484QWRF familyInterproscanJBrowse
CGIGAENSKFPP00000000883.1PF04484QWRF familyInterproscanJBrowse
CGRAC1ENSFVQP00000013103.1PF04484QWRF familyInterproscanJBrowse
CMOSAENSSJYP00000019508.1PF04484QWRF familyInterproscanJBrowse
CQUINevm.model.HiC_scaffold_14.73PF04484QWRF familyInterproscanJBrowse
CSP1Csp0G217710PF04484QWRF familyInterproscanJBrowse
DLINEENSDLIP00000000940.1PF04484QWRF familyInterproscanJBrowse
ECAVOENSLDHP00000043631.1PF04484QWRF familyInterproscanJBrowse
EVERRENSNOVP00005037688.1PF04484QWRF familyInterproscanJBrowse
HCOERENSBQFP00000011744.1PF04484QWRF familyInterproscanJBrowse
HIMPEevm.model.Chr05.918PF04484QWRF familyInterproscanJBrowse
HOCTOBRAKERHOCP00005016592.1PF04484QWRF familyInterproscanJBrowse
HOCTOg1280.t1.1PF04484QWRF familyInterproscanJBrowse
HVIRIg792.t1.1PF04484QWRF familyInterproscanJBrowse
HVIRIBRAKERKREP00000004153.1PF04484QWRF familyInterproscanJBrowse
LSARMENSAPQP00000029126.1PF04484QWRF familyInterproscanJBrowse
MALCIENSCIQP00000011097.1PF04484QWRF familyInterproscanJBrowse
MCOMPENSODKP00000014898.1PF04484QWRF familyInterproscanJBrowse
MDICHENSYDOP00000045318.1PF04484QWRF familyInterproscanJBrowse
MMURIBRAKERXEIP00000047001.1PF04484QWRF familyInterproscanJBrowse
MPAPUBRAKERKYLP00000012243.1PF04484QWRF familyInterproscanJBrowse
MSENIENSDTNP00000012770.1PF04484QWRF familyInterproscanJBrowse
MSENIENSDTNP00000012781.1PF04484QWRF familyInterproscanJBrowse
NVECTXP_001634826.2PF04484QWRF familyInterproscanJBrowse
NVECTXP_032240175.2PF04484QWRF familyInterproscanJBrowse
PMIZIc0468.g016.t1.p1PF04484QWRF familyInterproscanJBrowse
PMIZIc0468.g016.t2.p1PF04484QWRF familyInterproscanJBrowse
PPAPIPpa0G268360PF04484QWRF familyInterproscanJBrowse
PPENNENSDKPP00000015593.1PF04484QWRF familyInterproscanJBrowse
PSINE1g16696.t1PF04484QWRF familyInterproscanJBrowse
PUMBRc0049.g017.t2PF04484QWRF familyInterproscanJBrowse
PXISHHK74SY85_g13426PF04484QWRF familyInterproscanJBrowse
SCALLNY_Scal100_v1.53607.1PF04484QWRF familyInterproscanJBrowse
TSTEPBRAKERFUXP00000044256.1PF04484QWRF familyInterproscanJBrowse
TSTEPBRAKERFUXP00000015064.1PF04484QWRF familyInterproscanJBrowse

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