Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 218 gene–annotation pairs matching PF04542 across 148 genomes · 7621 ms.

Species with hits:CXAMA 85HOLIG 73MGRIS 24HVIRI 10AAURI2 6PMIZI 5HSYMB 3CCRUX 2EDIAP 2HIMPE 2TRUBR 2ASP1 1HECHI 1LSCAB 1MVIRU 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g187.t1PF04542Sigma-70 region 2 InterproscanJBrowse
AAURI2scaffold655.g4.t1PF04542Sigma-70 region 2 InterproscanJBrowse
AAURI2scaffold10.g194.t1PF04542Sigma-70 region 2 InterproscanJBrowse
AAURI2scaffold228.g19.t1PF04542Sigma-70 region 2 InterproscanJBrowse
AAURI2scaffold10.g96.t1PF04542Sigma-70 region 2 InterproscanJBrowse
AAURI2scaffold2648.g2.t1PF04542Sigma-70 region 2 InterproscanJBrowse
ASP1Acti_006273-T1PF04542Sigma-70 region 2 InterproscanJBrowse
CCRUXg1015.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CCRUXg537.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g19690.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g7383.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g3720.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g11337.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g4971.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g14141.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g14783.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6733.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g19309.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g11803.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g10380.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g11576.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17299.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g15386.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g22615.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g826.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g4148.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g20254.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g5947.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6951.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g21876.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g10693.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6605.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g1942.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17499.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g13830.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g7566.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g4979.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g18772.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6822.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g11938.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g7414.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g8086.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g16054.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g15811.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g1781.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17790.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g879.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g20201.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g16011.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g18465.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g19232.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17848.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6519.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g4780.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g21211.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g16936.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g10105.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g7502.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g18854.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g16998.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g3713.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17840.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g7930.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g966.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g3397.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g4573.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g8659.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6270.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17736.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g13224.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g18107.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g18092.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g198.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17290.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17738.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g13386.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g10032.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g5808.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g16744.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g13218.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g3236.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g22121.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g10916.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g11003.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17292.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g3379.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g6598.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g4790.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g22174.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g10509.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g24575.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g7733.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g17287.t1PF04542Sigma-70 region 2 InterproscanJBrowse
CXAMACxam_g12642.t1PF04542Sigma-70 region 2 InterproscanJBrowse
EDIAPKXJ04542.1PF04542Sigma-70 region 2 InterproscanJBrowse
EDIAPKXJ04696.1PF04542Sigma-70 region 2 InterproscanJBrowse
HECHIENSDJXP00000043920.1PF04542Sigma-70 region 2 InterproscanJBrowse
HIMPEevm.model.Contig129.25PF04542Sigma-70 region 2 InterproscanJBrowse
HIMPEevm.model.Contig136.37PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49736PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G19893PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50912PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50255PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G53539PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50964PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G20008PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00504.G55183PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52403PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52175PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G19415PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G20190PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49706PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G17408PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G20695PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52590PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00059.G26253PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52398PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50909PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52009PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50922PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00353.G43124PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G21296PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G21530PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51246PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G21527PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00150.G2477PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00150.G1981PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52027PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50158PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49704PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G20773PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00150.G2065PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00643.G15961PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G18365PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51981PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49224PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G53732PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G53653PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00522.G16644PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00014.G9321PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50890PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00014.G9869PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49433PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI01051.G37190PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G17331PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00014.G10485PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50148PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49567PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51956PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00059.G26215PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50135PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00014.G9955PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G53765PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI01051.G37000PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50134PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50960PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51345PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G18226PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52715PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G54019PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G50760PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51728PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00150.G2249PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51967PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00014.G10127PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G53150PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G51698PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G52031PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G49935PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00299.G46903PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00002.G21985PF04542Sigma-70 region 2 InterproscanJBrowse
HOLIGHOLI00001.G53668PF04542Sigma-70 region 2 InterproscanJBrowse
HSYMBHSymV2.0_g02.02355_t1PF04542Sigma-70 region 2 InterproscanJBrowse
HSYMBHSymV2.0_g02.02444_t1PF04542Sigma-70 region 2 InterproscanJBrowse
HSYMBHSymV2.0_g18.25763_t1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIBRAKERKREP00000023012.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIg20431.t1.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIBRAKERKREP00000023764.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIg19890.t1.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIg20135.t1.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIBRAKERKREP00000022924.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIBRAKERKREP00000022387.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIg20573.t1.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIBRAKERKREP00000023269.1PF04542Sigma-70 region 2 InterproscanJBrowse
HVIRIg20858.t1.1PF04542Sigma-70 region 2 InterproscanJBrowse
LSCABANN35065-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN35275-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN20731-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN22588-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN26820-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN25129-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN27083-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN34781-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN32715-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN31374-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN30204-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN27508-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN34710-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN31527-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN29521-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN25128-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN33195-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN23353-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN40172-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN27790-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN39023-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN27053-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN24719-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN24708-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MGRISANN31376-RAPF04542Sigma-70 region 2 InterproscanJBrowse
MVIRUscaffold121.g266.t1PF04542Sigma-70 region 2 InterproscanJBrowse
PMIZIc2377.g015.t1.p1PF04542Sigma-70 region 2 InterproscanJBrowse
PMIZIc2224.g005.t1.p1PF04542Sigma-70 region 2 InterproscanJBrowse
PMIZIc3383.g003.t1.p1PF04542Sigma-70 region 2 InterproscanJBrowse
PMIZIc2363.g009.t1.p1PF04542Sigma-70 region 2 InterproscanJBrowse
PMIZIc2224.g008.t1.p1PF04542Sigma-70 region 2 InterproscanJBrowse
TRUBRg4076.t1.1PF04542Sigma-70 region 2 InterproscanJBrowse
TRUBRBRAKERIOWP00000001495.1PF04542Sigma-70 region 2 InterproscanJBrowse

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