Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 43 gene–annotation pairs matching PF06454 across 148 genomes · 6349 ms.

Species with hits:MEFFL 3MCAPR 3NVECT 2CSP2 2PRUS 2PCYLI 2CSALA 2CMOSA 2PSPEC 1PCRUS 1PMIZI 1PLUTE 1PUMBR 1SCALL 1PLOBA 1PHARR 1PEVER 1PPENN 1AIDSS 1PCOMP 1PAUST 1OARBU 1ALIUI 1MVIRU 1MFOLI 1MCAPI 1MCACT 1LSCAB 1DLINE 1CXAMA 1CJARD 1ASP1 1TSTEP 1
SpeciesGene IDPfam termMatchSourceBrowser
AIDSSalvinactis_v1_g13266PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
ALIUIgene14637.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
ASP1Acti_022399-T1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CJARDENSAVKP00000022289.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CMOSAENSSJYP00000005279.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CMOSAENSSJYP00000005291.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CSALAENSOFVP00000020174.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CSALAENSOFVP00000020158.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CSP2P_ENSNWCP00000006197.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CSP2P_ENSNWCP00000006187.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
CXAMACxam_g8255.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
DLINEENSDLIP00000024236.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
LSCABANN01749-RAPF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MCACTBRAKERNUSP00000014235.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MCAPIg7188.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MCAPRXP_068723698.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MCAPRXP_068723700.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MCAPRXP_068723693.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MEFFLENSTIFP00000043453.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MEFFLENSTIFP00000043446.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MEFFLENSTIFP00000043441.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MFOLIXP_068694807.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
MVIRUscaffold1.g111.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
NVECTXP_032232594.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
NVECTXP_048586839.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
OARBUENSPTBP00000023211.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PAUSTpaus_s0016.g125.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PCOMPPorites_compressa_HIv1___TS.g35681.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PCRUSPcrG018253.mRNA1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PCYLIENSZOFP00000024877.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PCYLIENSZOFP00000024886.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PEVERCAH3017699.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PHARRKAM7441358.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PLOBAENSNQRP00000031100.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PLUTEXP_073242244.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PMIZIc0038.g017.t1.p1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PPENNENSDKPP00000006633.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PRUSENSGYQP00005021626.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PRUSENSGYQP00005021633.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PSPECpspe_0.1.m1.52577.m1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
PUMBRc0109.g019.t1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
SCALLNY_Scal100_v1.28303.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse
TSTEPBRAKERFUXP00000044344.1PF06454THH1/TOM1/TOM3 domainInterproscanJBrowse

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