Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF07943 across 148 genomes · 21 ms.

Species with hits:Hydra oligactis 3Cassiopea xamachana 1Hydractinia symbiolongicarpus 1Hydra viridissima 1Montipora grisea 1Morbakka virulenta 1Stylophora pistillata 1Trachythela sp. YZ-2020 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g837.t1PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00522.G17041PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52229PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9548PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02283_t1PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022461.1PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Montipora griseaANN34835-RAPF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Morbakka virulentascaffold121.g328.t1PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Stylophora pistillataPFX11121.1PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse
Trachythela sp. YZ-2020Clavulariidae_g13551PF07943Penicillin-binding protein 5, C-terminal domainInterproscanJBrowse

TOP