← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 259 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14379 | LIMKAIN B LKAP | 178 / 259 | 68.7% | 90.8% of 196 | ≥50% support |
| Pfam | PF12872 | OST-HTH | 198 / 259 | 76.5% | 88.4% of 224 | ≥50% support |
| Pfam | PF01936 | NYN | 181 / 259 | 69.9% | 80.8% of 224 | ≥50% support |
| Pfam | PF11608 | MARF1_RRM1 — MARF1, RNA recognition motif 1 | 163 / 259 | 62.9% | 72.8% of 224 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 154 / 259 | 59.5% | 68.8% of 224 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 196 / 259 | 75.7% | 96.6% of 203 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 185 / 259 | 71.4% | 91.1% of 203 | ≥50% support |
| GO | GO:0004540 Molecular Function | RNA nuclease activity | 181 / 259 | 69.9% | 89.2% of 203 | ≥50% support |
| GO | GO:0005777 Cellular Component | peroxisome | 178 / 259 | 68.7% | 87.7% of 203 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 178 / 259 | 68.7% | 87.7% of 203 | ≥50% support |
| GO | GO:1905762 Molecular Function | CCR4-NOT complex binding | 178 / 259 | 68.7% | 87.7% of 203 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 159 / 259 | 61.4% | 78.3% of 203 | ≥50% support |
| KEGG | K17573 | LKAP, MARF1 — Protein phosphatases and associated proteins | 147 / 259 | 56.8% | 95.5% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0124.g13.t1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Acropora acuminata | aacu_s0124.g14.t1 | XP_044184866.1 | meiosis regulator and mRNA stability factor 1-like isoform X1 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Alatina alata | Aala_g2053.t1 | XP_011402684.2 | PREDICTED: uncharacterized protein LOC105312051 [Amphimedon queenslandica] | P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | JBrowse |
| Alatina alata | Aala_g2252.t1 | CAB4043825.1 | Hypothetical predicted protein [Paramuricea clavata] | Q8VIG2 Meiosis regulator and mRNA stability factor 1 OS=Rattus norv | JBrowse |
| Alatina alata | Aala_g2253.t1 | KAH3871342.1 | hypothetical protein DPMN_034540, partial [Dreissena polymorpha] | Q5UPG2 Uncharacterized WD repeat-containing protein L84 OS=Acantham | JBrowse |
| Alatina alata | Aala_g763.t1 | XP_030429805.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC115656798, partial [Gopherus evgoodei] | Q86UP8 General transcription factor II-I repeat domain-containing p | JBrowse |
| Aurelia aurita | scaffold163.g17.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold163.g17.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold610.g3.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold610.g3.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold610.g4.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000018895.1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Acropora austera | ENSKKQP00000018910.1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | B2GUN4 Meiosis regulator and mRNA stability factor 1 OS=Xenopus tro | JBrowse |
| Acropora awi | aawi_s0385.g10.t1 | XP_044184866.1 | meiosis regulator and mRNA stability factor 1-like isoform X1 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Acropora cervicornis | KAK2571984.1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Acropora cytherea | acyt_s0134.g15.t1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Acropora cytherea | acyt_s1005.g1.t1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | E1BZ85 Meiosis regulator and mRNA stability factor 1 OS=Gallus gall | JBrowse |
| Acropora digitifera | chr13Alt.g27294.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0131.g17.t1 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
| Acropora echinata | aech_s0131.g17.t2 | XP_029191855.2 | meiosis regulator and mRNA stability factor 1-like isoform X2 [Acropora millepora] | Q9Y4F3 Meiosis regulator and mRNA stability factor 1 OS=Homo sapien | JBrowse |
