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This orthogroup contains 221 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 221 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12446 | TESMIN/TSO1-RELATED | 184 / 221 | 83.3% | 99.5% of 185 | ≥80% support |
| Pfam | PF03638 | TCR — Tesmin/TSO1-like CXC domain, cysteine-rich domain | 184 / 221 | 83.3% | 100.0% of 184 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 181 / 221 | 81.9% | 100.0% of 181 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 181 / 221 | 81.9% | 100.0% of 181 | ≥80% support |
| KEGG | K21776 | LIN54 — Cellular senescence | 155 / 221 | 70.1% | 99.4% of 156 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0007.g87.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora acuminata | aacu_s1641.g2.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | – | JBrowse |
| Aurelia aurita | scaffold9.g39.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold9.g39.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold114.g15.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold114.g17.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold114.g17.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000035012.1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora austera | ENSKKQP00000035022.1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora awi | aawi_s0148.g5.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora cervicornis | KAK2563793.1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Aurelia coerulea | evm.model.ptg000006l.176 | EDO39204.1 | predicted protein, partial [Nematostella vectensis] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora cytherea | acyt_s0008.g64.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q08CM4 Protein lin-54 homolog OS=Danio rerio OX=7955 GN=lin54 PE=1 | JBrowse |
| Acropora cytherea | acyt_s0670.g1.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora digitifera | chr3Alt.g7078.t1 | none | – | JBrowse | |
| Acropora digitifera | chr3Alt.g7078.t2 | none | – | JBrowse | |
| Acropora echinata | aech_s0160.g5.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Actinia equina | EGACTEQ4350046253-PA | XP_031572762.1 | protein lin-54 homolog [Actinia tenebrosa] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Actinia equina | EGACTEQ4350046253-PB | XP_031572762.1 | protein lin-54 homolog [Actinia tenebrosa] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
| Acropora florida | aflo_s0052.g115.t1 | XP_029193964.1 | protein lin-54 homolog [Acropora millepora] | Q5RBN8 Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 | JBrowse |
