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Support counts the member genes carrying the term. % of genes is that count over all 185 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48033 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | 154 / 185 | 83.2% | 93.3% of 165 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 164 / 185 | 88.7% | 100.0% of 164 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 165 / 185 | 89.2% | 100.0% of 165 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 165 / 185 | 89.2% | 100.0% of 165 | ≥80% support |
| GO | GO:0000790 Cellular Component | chromatin | 154 / 185 | 83.2% | 93.3% of 165 | ≥80% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 154 / 185 | 83.2% | 93.3% of 165 | ≥80% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 154 / 185 | 83.2% | 93.3% of 165 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0081.g78.t1 | XP_015766578.1 | PREDICTED: uncharacterized protein LOC107345390 [Acropora digitifera] | Q13151 Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens O | JBrowse |
| Acropora acuminata | aacu_s1413.g1.t1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora austera | ENSKKQP00000015603.1 | XP_015766578.1 | PREDICTED: uncharacterized protein LOC107345390 [Acropora digitifera] | Q13151 Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens O | JBrowse |
| Acropora austera | ENSKKQP00000017432.1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Acropora awi | aawi_s0024.g92.t1 | XP_029211366.2 | RNA-binding protein 34-like [Acropora millepora] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
| Acropora awi | aawi_s0024.g95.t1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora cytherea | acyt_s0015.g101.t1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora cytherea | acyt_s0015.g104.t1 | XP_015766605.1 | PREDICTED: uncharacterized protein LOC107345416 [Acropora digitifera] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
| Acropora digitifera | chr11Alt.g23186.t1 | none | – | JBrowse | |
| Acropora digitifera | chr11Alt.g23189.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0052.g12.t1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora echinata | aech_s0052.g15.t1 | XP_029211366.2 | RNA-binding protein 34-like [Acropora millepora] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
| Actinia equina | EGACTEQ4350007888-PA | XP_031561599.1 | polyadenylate-binding protein, cytoplasmic and nuclear-like [Actinia tenebrosa] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Actinia equina | EGACTEQ4350027022-PA | XP_031561599.1 | polyadenylate-binding protein, cytoplasmic and nuclear-like [Actinia tenebrosa] | P51989 Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xeno | JBrowse |
| Actinia equina | EGACTEQ4350036578-PA | XP_031561599.1 | polyadenylate-binding protein, cytoplasmic and nuclear-like [Actinia tenebrosa] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Acropora florida | aflo_s0374.g13.t1 | XP_029211366.2 | RNA-binding protein 34-like [Acropora millepora] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
| Acropora gemmifera | agem_s0007.g149.t1 | XP_029211366.2 | RNA-binding protein 34-like [Acropora millepora] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
| Acropora gemmifera | agem_s0007.g154.t1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora hemprichii | Ahemp_017802-T1 | XP_029211389.2 | LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Acropora millepora] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora hyacinthus | ahya_s0196.g12.t1 | XP_015766605.1 | PREDICTED: uncharacterized protein LOC107345416 [Acropora digitifera] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
