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Support counts the member genes carrying the term. % of genes is that count over all 181 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10927 | RIBOSOME MATURATION PROTEIN SBDS | 163 / 181 | 90.1% | 100.0% of 163 | ≥80% support |
| Pfam | PF09377 | SBDS_domain_II — SBDS protein, domain II | 159 / 181 | 87.9% | 97.6% of 163 | ≥80% support |
| Pfam | PF20268 | SBDS_C — SBDS protein, C-terminal domain | 150 / 181 | 82.9% | 92.0% of 163 | ≥80% support |
| Pfam | PF01172 | SBDS | 147 / 181 | 81.2% | 90.2% of 163 | ≥80% support |
| GO | GO:0042254 Biological Process | ribosome biogenesis | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| GO | GO:0042256 Biological Process | cytosolic ribosome assembly | 144 / 181 | 79.6% | 90.0% of 160 | ≥50% support |
| KEGG | K14574 | SDO1, SBDS — Ribosome biogenesis | 139 / 181 | 76.8% | 99.3% of 140 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nemopilema nomurai | BRAKERMNPP00000006640.1 | CAH3181840.1 | unnamed protein product [Porites evermanni] | A5D8M6 Ribosome maturation protein SBDS OS=Xenopus laevis OX=8355 G | JBrowse |
| Nemopilema nomurai | g238.t1.1 | none | – | JBrowse | |
| Nanomia septata | ANN01043-RA | XP_002167770.1 | ribosome maturation protein SBDS [Hydra vulgaris] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| Nanomia septata | ANN01044-RA | PIO27090.1 | hypothetical protein AB205_0044930, partial [Lithobates catesbeianus] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| Nematostella vectensis | XP_001636237.2 | XP_001636237.2 | ribosome maturation protein SBDS [Nematostella vectensis] | A5D8M6 Ribosome maturation protein SBDS OS=Xenopus laevis OX=8355 G | JBrowse |
| Oculina arbuscula | ENSPTBP00000007590.1 | XP_020611735.1 | ribosome maturation protein SBDS-like [Orbicella faveolata] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| Oculina arbuscula | ENSPTBP00000007604.1 | XP_020611735.1 | ribosome maturation protein SBDS-like [Orbicella faveolata] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| Orbicella faveolata | XP_020611735.1 | XP_020611735.1 | ribosome maturation protein SBDS-like [Orbicella faveolata] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| Orbicella franksi | XP_081304116.1 | XP_020611735.1 | ribosome maturation protein SBDS-like [Orbicella faveolata] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| Oculina patagonica | KAL9981269.1 | XP_020611735.1 | ribosome maturation protein SBDS-like [Orbicella faveolata] | Q5ZIY4 Ribosome maturation protein SBDS OS=Gallus gallus OX=9031 GN | JBrowse |
| OUT | Bolinopsis_microptera+XP_063674598.1 | none | – | JBrowse | |
| OUT | Bolinopsis_microptera+XP_063674599.1 | none | – | JBrowse | |
| OUT | Corticium_candelabrum+XP_062507107.1 | none | – | JBrowse | |
| OUT | Halichondria_panicea+XP_064392132.1 | none | – | JBrowse | |
| OUT | Oscarella_lobularis+XP_065831335.1 | none | – | JBrowse | |
| OUT | Sycon_ciliatum+XP_065174933.1 | none | – | JBrowse | |
| Pocillopora acuta | Pocillopora_acuta_HIv2___TS.g26091.t1 | none | A5D8M6 Ribosome maturation protein SBDS OS=Xenopus laevis OX=8355 G | JBrowse | |
| Porites australiensis | paus_s0153.g31.t1 | none | – | JBrowse | |
| Paramuricea clavata | CAB4001834.1 | CAB4001834.1 | Ribosome maturation SBDS [Paramuricea clavata] | A5D8M6 Ribosome maturation protein SBDS OS=Xenopus laevis OX=8355 G | JBrowse |
| Paramuricea clavata | CAB4001835.1 | CAB4001835.1 | Ribosome maturation SBDS [Paramuricea clavata] | A5D8M6 Ribosome maturation protein SBDS OS=Xenopus laevis OX=8355 G | JBrowse |
