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Support counts the member genes carrying the term. % of genes is that count over all 162 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11239 | DNA-DIRECTED RNA POLYMERASE | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| Pfam | PF02150 | RNA_POL_M_15KD — RNA polymerases M/15 Kd subunit | 136 / 162 | 84.0% | 94.4% of 144 | ≥80% support |
| GO | GO:0001193 Biological Process | maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| GO | GO:0006283 Biological Process | transcription-coupled nucleotide-excision repair | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| GO | GO:0006367 Biological Process | transcription initiation at RNA polymerase II promoter | 144 / 162 | 88.9% | 100.0% of 144 | ≥80% support |
| KEGG | K03017 | RPB9, POLR2I — DNA repair and recombination proteins | 135 / 162 | 83.3% | 100.0% of 135 | ≥80% support |
| Pfam | PF01096 | TFIIS_C — Transcription factor S-II (TFIIS) | 129 / 162 | 79.6% | 89.6% of 144 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 129 / 162 | 79.6% | 89.6% of 144 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 129 / 162 | 79.6% | 89.6% of 144 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita | scaffold48.g29.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000012008.1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Acropora cervicornis | KAK2568727.1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | Q32P73 DNA-directed RNA polymerase II subunit RPB9 OS=Bos taurus OX | JBrowse |
| Acropora digitifera | chr14Alt.g29864.t1 | none | – | JBrowse | |
| Actinia equina | EGACTEQ4350014647-PA | XP_031564815.1 | DNA-directed RNA polymerase II subunit RPB9-like [Actinia tenebrosa] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Actinia equina | EGACTEQ4350014647-PB | XP_031564815.1 | DNA-directed RNA polymerase II subunit RPB9-like [Actinia tenebrosa] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Acropora hemprichii | Ahemp_007496-T1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g14272 | XP_020907698.2 | DNA-directed RNA polymerase II subunit RPB9 [Exaiptasia diaphana] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Acropora loripes | alor_g8535.t1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Actinia mediterranea | ENSQPTP00000033498.1 | XP_031564815.1 | DNA-directed RNA polymerase II subunit RPB9-like [Actinia tenebrosa] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Actinia mediterranea | ENSQPTP00000075802.1 | XP_031564815.1 | DNA-directed RNA polymerase II subunit RPB9-like [Actinia tenebrosa] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Acropora millepora | XP_029185668.1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000002528.1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Astreopora myriophthalma | g4836.t1.1 | none | – | JBrowse | |
| Acropora palmata | XP_074630445.1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Astrangia poculata | evm.model.Ap13.3007 | XP_020605153.1 | DNA-directed RNA polymerase II subunit RPB9-like [Orbicella faveolata] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Acropora pulchra | FUN_031212-T1 | XP_015775222.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Acropora digitifera] | P36954 DNA-directed RNA polymerase II subunit RPB9 OS=Homo sapiens | JBrowse |
| Actinernus sp. WN-2022 | Acti_033410-T1 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_10022 | none | – | JBrowse | |
| Aurelia sp. 4 Dawson et al 2005 | ENSDKXP00000013479.1 | none | – | JBrowse |
