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This orthogroup contains 141 genes from 86 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 141 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0005509 Molecular Function | calcium ion binding | 117 / 141 | 83.0% | 100.0% of 117 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 114 / 141 | 80.9% | 97.4% of 117 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 114 / 141 | 80.9% | 97.4% of 117 | ≥80% support |
| Pfam | PF00028 | Cadherin | 111 / 141 | 78.7% | 88.8% of 125 | ≥50% support |
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 97 / 141 | 68.8% | 77.6% of 125 | ≥50% support |
| Pfam | PF00008 | EGF | 94 / 141 | 66.7% | 75.2% of 125 | ≥50% support |
| Pfam | PF07645 | EGF_CA — Calcium-binding EGF domain | 91 / 141 | 64.5% | 72.8% of 125 | ≥50% support |
| Pfam | PF14670 | FXa_inhibition — Coagulation Factor Xa inhibitory site | 91 / 141 | 64.5% | 72.8% of 125 | ≥50% support |
| Pfam | PF12661 | hEGF — Human growth factor-like EGF | 80 / 141 | 56.7% | 64.0% of 125 | ≥50% support |
| Pfam | PF12662 | cEGF — Complement Clr-like EGF-like | 78 / 141 | 55.3% | 62.4% of 125 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0179.g59.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Acropora austera | ENSKKQP00000043996.1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora austera | ENSKKQP00000044009.1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora awi | aawi_s0015.g144.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora cervicornis | KAK2574589.1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora cytherea | acyt_s0021.g123.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora digitifera | chr9Alt.g19213.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0011.g248.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | Q9Y5F3 Protocadherin beta-1 OS=Homo sapiens OX=9606 GN=PCDHB1 PE=1 | JBrowse |
| Acropora echinata | aech_s0011.g249.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Actinia equina | EGACTEQ4350015176-PA | XP_031572090.1 | protocadherin Fat 1-like [Actinia tenebrosa] | O88689 Protocadherin alpha-4 OS=Mus musculus OX=10090 GN=Pcdha4 PE= | JBrowse |
| Actinia equina | EGACTEQ4350035350-PA | XP_031574661.1 | protocadherin Fat 4-like [Actinia tenebrosa] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora florida | aflo_s0003.g110.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora gemmifera | agem_s0002.g218.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora hemprichii | Ahemp_008507-T1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora hyacinthus | ahya_s0001.g378.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | Q9Y5F3 Protocadherin beta-1 OS=Homo sapiens OX=9606 GN=PCDHB1 PE=1 | JBrowse |
| Acropora hyacinthus | ahya_s0001.g379.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora intermedia | aint_s0135.g4.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora loripes | alor_g24537.t1 | XP_044173668.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora millepora] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Actinia mediterranea | ENSQPTP00000028726.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000028748.1 | XP_031574661.1 | protocadherin Fat 4-like [Actinia tenebrosa] | O88277 Protocadherin Fat 2 OS=Rattus norvegicus OX=10116 GN=Fat2 PE | JBrowse |
