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Support counts the member genes carrying the term. % of genes is that count over all 123 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 112 / 123 | 91.1% | 99.1% of 113 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 112 / 123 | 91.1% | 99.1% of 113 | ≥80% support |
| PANTHER | PTHR24028 | CADHERIN-87A | 74 / 123 | 60.2% | 65.5% of 113 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 74 / 123 | 60.2% | 65.5% of 113 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora millepora | XP_029199021.2 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora muricata | amur_s0084.g3.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9Y5F6 Protocadherin gamma-C5 OS=Homo sapiens OX=9606 GN=PCDHGC5 PE | JBrowse |
| Acropora muricata | amur_s0084.g4.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000015783.1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q6WYY1 Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X | JBrowse |
| Astreopora myriophthalma | g17902.t1.1 | none | – | JBrowse | |
| Acropora nasuta | anas_s0119.g45.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora palmata | XP_074621753.1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap5.2390 | XP_020604655.1 | protocadherin-11 X-linked-like [Orbicella faveolata] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora pulchra | FUN_006656-T1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora selago | asel_s0079.g4.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Actinernus sp. WN-2022 | Acti_046191-T1 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_05311 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_05312 | none | – | JBrowse | |
| Actinia tenebrosa | XP_031569953.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Actinia tenebrosa | XP_031569954.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Actinia tenebrosa | XP_031569955.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Actinia tenebrosa | XP_031569957.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Acropora tenuis | aten_s0134.g53.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000000503.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | Q9NPG4 Protocadherin-12 OS=Homo sapiens OX=9606 GN=PCDH12 PE=1 SV=1 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000000509.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | Q9NPG4 Protocadherin-12 OS=Homo sapiens OX=9606 GN=PCDH12 PE=1 SV=1 | JBrowse |
