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Support counts the member genes carrying the term. % of genes is that count over all 39 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 38 / 39 | 97.4% | 100.0% of 38 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 38 / 39 | 97.4% | 100.0% of 38 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 38 / 39 | 97.4% | 100.0% of 38 | ≥80% support |
| PANTHER | PTHR48033 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | 31 / 39 | 79.5% | 81.6% of 38 | ≥50% support |
| GO | GO:0000790 Cellular Component | chromatin | 31 / 39 | 79.5% | 81.6% of 38 | ≥50% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 31 / 39 | 79.5% | 81.6% of 38 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 31 / 39 | 79.5% | 81.6% of 38 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia equina | EGACTEQ4350029710-PA | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | Q13148 TAR DNA-binding protein 43 OS=Homo sapiens OX=9606 GN=TARDBP | JBrowse |
| Actinia equina | EGACTEQ4350050438-PA | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Actinia mediterranea | ENSQPTP00000030502.1 | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Actinia mediterranea | ENSQPTP00000068085.1 | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Actinernus sp. WN-2022 | Acti_006723-T1 | none | – | JBrowse | |
| Actinia tenebrosa | XP_031558236.1 | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Condylactis gigantea | ENSKFPP00000025501.1 | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | Q22037 Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis | JBrowse |
| Cladopsammia gracilis | BRAKERTYJP00000009907.1 | none | – | JBrowse | |
| Duncanopsammia axifuga | ENSXFYP00000048584.1 | CAH3108803.1 | unnamed protein product [Porites lobata] | – | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000048592.1 | CAH3108803.1 | unnamed protein product [Porites lobata] | Q13148 TAR DNA-binding protein 43 OS=Homo sapiens OX=9606 GN=TARDBP | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000030081.1 | CAH3108803.1 | unnamed protein product [Porites lobata] | Q13148 TAR DNA-binding protein 43 OS=Homo sapiens OX=9606 GN=TARDBP | JBrowse |
| Dendrophyllia cribrosa | g26167.t1.1 | none | – | JBrowse | |
| Diadumene lineata | ENSDLIP00000018161.1 | XP_031558236.1 | polyadenylate-binding protein 1-like, partial [Actinia tenebrosa] | – | JBrowse |
| Nematostella vectensis | XP_032220373.1 | XP_032220373.1 | uncharacterized protein LOC5519732 [Nematostella vectensis] | – | JBrowse |
| Nematostella vectensis | XP_032223456.2 | XP_032223456.2 | nucleolin [Nematostella vectensis] | P20397 Nucleolin OS=Xenopus laevis OX=8355 GN=ncl PE=2 SV=3 | JBrowse |
| Porites australiensis | paus_s0248.g20.t1 | none | – | JBrowse | |
| Porites compressa | Porites_compressa_HIv1___RNAseq.g36437.t1 | none | – | JBrowse | |
| Porites cylindrica | ENSZOFP00000008010.1 | none | – | JBrowse | |
| Porites cylindrica | ENSZOFP00000008011.1 | none | – | JBrowse | |
| Porites divaricata | ENSHHBP00000014819.1 | none | – | JBrowse |
