← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 10 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 10 / 10 | 100.0% | 100.0% of 10 | 100% consensus |
| PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | 6 / 10 | 60.0% | 60.0% of 10 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Chrysogorgia sp. JL179-B06 | Csp0G476210 | none | – | JBrowse | |
| Dendronephthya gigantea | XP_028395361.1 | XP_028395361.1 | transcription factor SOX-2-like [Dendronephthya gigantea] | P48434 Transcription factor SOX-9 OS=Gallus gallus OX=9031 GN=SOX9 | JBrowse |
| Eunicella verrucosa | ENSNOVP00005016262.1 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | Q6DFF5 Transcription factor Sox-9-B OS=Xenopus laevis OX=8355 GN=so | JBrowse |
| Heliopora coerulea | ENSBQFP00000028343.1 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | O55170 Transcription factor SOX-10 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Hemicorallium imperiale | evm.model.Chr11.475 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | B7ZR65 Transcription factor Sox-9-A OS=Xenopus laevis OX=8355 GN=so | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000012686.1 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | O55170 Transcription factor SOX-10 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000012692.1 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | O55170 Transcription factor SOX-10 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Muricea muricata | BRAKERXEIP00000054044.1 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | Q04887 Transcription factor SOX-9 OS=Mus musculus OX=10090 GN=Sox9 | JBrowse |
| Paramuricea clavata | CAB3983572.1 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | Q6VVD7 Transcription factor Sox-8 OS=Xenopus laevis OX=8355 GN=sox8 | JBrowse |
| Paragorgia papillata | Ppa0G290070 | CAB3983572.1 | transcription factor SOX-9-like [Paramuricea clavata] | Q04887 Transcription factor SOX-9 OS=Mus musculus OX=10090 GN=Sox9 | JBrowse |
