Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 27 gene–annotation pairs matching IPR034109 across 148 genomes · 29 ms.

Species with hits:Leptoseris scabra 2Aurelia aurita 1Nemopilema nomurai 1Sanderia malayensis 1Porites rus 1Pelagia noctiluca 1Porites lutea 1Porites lobata 1Porites evermanni 1Porites divaricata 1Porites cylindrica 1Porites compressa 1Oculina patagonica 1Morbakka virulenta 1Aurelia aurita complex sp. Pacific 1Madracis senaria 1Montipora foliosa 1Montipora efflorescens 1Montipora capricornis 1Montipora cactus 1Madracis auretenra 1Lophelia pertusa 1Desmophyllum pertusum 1Calvadosia cruxmelitensis 1Blastomussa wellsi 1Tripedalia maipoensis 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia auritascaffold225.g23.t1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold2817.g1.t1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Blastomussa wellsiBRAKERLUSP00000027639.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Calvadosia cruxmelitensisg634.t1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Desmophyllum pertusumKAJ7378318.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Lophelia pertusaOS493_023565-T1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Leptoseris scabraANN34814-RAIPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Leptoseris scabraANN34423-RAIPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Madracis auretenraENSIHXP00000032854.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Montipora cactusBRAKERNUSP00000026216.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Montipora capricornisXP_068761633.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Montipora efflorescensENSTIFP00000042187.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Montipora foliosaXP_068673572.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Madracis senariaENSVTRP00000005728.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Morbakka virulentascaffold84.g60.t1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Nemopilema nomuraiBRAKERMNPP00000006582.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Oculina patagonicaKAL9956172.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites compressaPorites_compressa_HIv1___RNAseq.g12701.t1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites cylindricaENSZOFP00000028890.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites divaricataENSHHBP00000028689.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites evermanniCAH3017329.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites lobataENSNQRP00000057749.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites luteaXP_073247116.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Pelagia noctilucaENSXLYP00000018576.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Porites rusENSGYQP00005033614.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Sanderia malayensisENSXQXP00000015574.1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse
Tripedalia maipoensisg6533.t1IPR034109Sm-like protein Lsm11, middle domainInterproscanJBrowse

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