Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 58 gene–annotation pairs matching PF00116 across 148 genomes · 42 ms.

Species with hits:Candelabrum cocksii 6 Hydra oligactis 5 Hydractinia echinata 4 Millepora complanata 4 Echinopora horrida 3 Aurelia aurita complex sp. Pacific 3 Cassiopea xamachana 3 Morbakka virulenta 2 Millepora dichotoma 2 Millepora alcicornis 2 Hydra viridissima 2 Xenia sp. Carnegie-2017 2 Bougainvillia cf. muscus 2 Eunicella cavolini 1 Muricea muricata 1 Rhopilema esculentum 1 Paraphelliactis xishaensis sp. nov. 1 Palythoa mizigama 1 Porites evermanni 1 Orbicella faveolata 1 Acropora austera 1 Acropora awi 1 Micromussa lordhowensis 1 Dendronephthya gigantea 1 Acropora selago 1 Actinernus sp. WN-2022 1 Actinia tenebrosa 1 Hydractinia symbiolongicarpus 1 Chrysogorgia sp. JL179-B06 1 Galaxea fascicularis 1 Acropora acuminata 1

Species	Gene ID	Pfam term	Match	Source	Browser
Acropora acuminata	aacu_s1014.g3.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold228.g41.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold1904.g6.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold1904.g6.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Acropora austera	ENSKKQP00000051395.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Acropora awi	aawi_s1149.g3.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Acropora selago	asel_s1366.g2.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Actinernus sp. WN-2022	Acti_006343-T1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Actinia tenebrosa	YP_009701417.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Bougainvillia cf. muscus	M_g18415.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Bougainvillia cf. muscus	M_g43600.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Candelabrum cocksii	ENSQNNP00000018408.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Candelabrum cocksii	ENSQNNP00000026043.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Candelabrum cocksii	ENSQNNP00000018423.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Candelabrum cocksii	ENSQNNP00000018397.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Candelabrum cocksii	ENSQNNP00000020306.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Candelabrum cocksii	ENSQNNP00000018413.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Chrysogorgia sp. JL179-B06	Csp0G455790	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g2286.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g2286.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g20428.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Dendronephthya gigantea	YP_003331262.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Eunicella cavolini	ENSLDHP00000049117.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Echinopora horrida	ENSJVNP00000019248.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Echinopora horrida	ENSJVNP00000025301.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Echinopora horrida	ENSJVNP00000046342.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Galaxea fascicularis	gfas1.m1.22947.m1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000056441.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000053145.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000055520.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000053807.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra oligactis	HOLI00655.G56801	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra oligactis	HOLI00256.G40561	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21849	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G10466	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra oligactis	HOLI02969.G47614	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02315_t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023335.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000022407.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora alcicornis	ENSCIQP00000023546.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora alcicornis	ENSCIQP00000023556.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora complanata	ENSODKP00000026266.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora complanata	ENSODKP00000001080.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora complanata	ENSODKP00000026252.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora complanata	ENSODKP00000026259.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora dichotoma	ENSYDOP00000011869.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Millepora dichotoma	ENSYDOP00000011873.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Micromussa lordhowensis	ENSSYXP00000041795.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000010686.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Morbakka virulenta	scaffold2441.g1.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Morbakka virulenta	scaffold121.g137.t1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Orbicella faveolata	YP_271958.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Porites evermanni	CAH3196776.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Palythoa mizigama	c1841.g006.t1.p1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Paraphelliactis xishaensis sp. nov.	HK74SY85_g32035	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Rhopilema esculentum	YP_009421324.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Xenia sp. Carnegie-2017	XP_046861948.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse
Xenia sp. Carnegie-2017	XP_046861941.1	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	Interproscan	JBrowse