Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF01458 across 148 genomes · 6619 ms.

Species with hits:CXAMA 4HOLIG 3HSYMB 2TSP 2AAURI2 1CCRUX 1EDIAP 1HECHI 1MGRIS 1MMURI 1MVIRU 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1930.g5.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
CCRUXg656.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
CXAMACxam_g9911.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
CXAMACxam_g1328.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
CXAMACxam_g9913.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
CXAMACxam_g1330.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
EDIAPKXJ04299.1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
HECHIENSDJXP00000045650.1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
HOLIGHOLI00002.G21712PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
HOLIGHOLI00002.G21712PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
HOLIGHOLI00002.G21716PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
HSYMBHSymV2.0_g17.25722_t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
HSYMBHSymV2.0_g17.25721_t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
MGRISANN36899-RAPF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
MMURIBRAKERXEIP00000054622.1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
MVIRUscaffold121.g302.t1PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
TSPClavulariidae_g13189PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse
TSPClavulariidae_g13187PF01458SUF system FeS cluster assembly, SufBDInterproscanJBrowse

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